| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5292 |
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| Symbol | |
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| ID | 6279972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1471356 |
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| End bp | 1473032 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616378 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001889021 |
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| Protein GI | 187919990 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT TCGCCGCCCT CTACACTGCG CTCGACGCAA CCACGTCCAC GCACGACAAA
CTCGAAGCGC TTACCAGCTA CTTCGCCGTG GCCGAACCGG AAGACGCCGC GTGGGCGTCG
TATTTTCTCG CCGGCGGCAA ACCGCGCCAA TCGGTGCCGA CGCGTCTGCT GACCGAGATC
GCCCGCGAGC GTGCCGGCTT GCCCGCATGG TTATTCGAAG AGTCTTATCA CGCAGTGGGC
GATCTGGCCG AAACCATCGC CCATATCCTG CCGCCCGCGC AACGCAGTTC GGAATTGGGT
CTCACGCAAT GGATCGAGCA ACGCGTGCTC ACTCTGCGTG GCGTGTCGCC GGAAGAGTTG
CGCACGCGTT TGCTCAGCTA CTGGGACGAA CTCGATTGGG GCGGCCGTTT CCTGCTGACC
AAACTGATCG GCGGCGGGTT TCGGGTGGGC GTTGCGCGGC AACTGGTGGT GAGGGCGCTC
GCGGAAGTCG CGGGTGTCGA TCATAAGCGG ATCGCGCAGC GCATGGTCGG TTGGACCGAC
TCGCAGCAGA AGCCCGATGC CGCGCGCTAT CTGCGTTTGA TCGCACCGGA GGCAACAGGC
GATGAGACGC AGGCCGGAGA TCATCCACAC GAGAGCGACC TCGGCCTGCC GTATCCGTTC
TTTCTCGCGC ATCCATTGCA AGCCGATCCG GCGACGCTCG GCGATCCGTC GCAATGGCAG
ATCGAATGGA AGTGGGATGG GATTCGCGCG CAACTCGTCA AACGTGGCGG GCGTGTCTGG
CTATGGTCAC GCGGCGAGGA TCTGATCACG GATCGCTTCC CAGAAGTAGC GGCGTTGGGT
GAGGCCTTGC CGGATGGTTT CGTGGTCGAC GGAGAAATTC TCGCGTGGGA ACGCGGCGAC
ATGGCGCCAT TGCCGTTCGC GCGCTTGCAA CCGCGCATTG CCCGCAAAAC GCTGACTAAA
AAAATCCTCG CCGATTCGCC GGCTACGCTG CTTGCCTACG ATTTGCTCGA AGCGCGCGGC
CAGGACCTGC GCATGACGCC GCTCGTCGAG CGGCGCGCAC GACTGGAGGC GCTGGCTGTT
TCAATCGAAG GCACGCTCGC GCAAGATCTG CTGCGCGTGT CGCCACTGGT TGATGCAGTG
GACTGGCAGG CGCTTGCTGC GTTACGTGAC GAGAGCCGCG CGCGTGGCGT GGAAGGGCTC
ATGGTCAAGC AACGCGAATC GATGTACGGC GTGGGCCGCA CCAAAGCCTC CGGCACGTGG
TGGAAATGGA AGATCGATCC GTATGCAATC GATGCGGTGT TGCTCTACGC ACAACGCGGC
CACGGCCGCC GTGCAAGTCT CTACACCGAT TTCACTTTCG CGGTATGGGA CGAGGCGAAC
GGCGTACGCA CGTTGGTGCC GTTCGCGAAA GCTTATTCCG GTCTAACCGA CGAAGAAATG
CGCCAGGTGG ACGCGATCGT GCGCAAGACC ACGATCGAAA AATTTGGCCC CGTGCGCAGC
GTCACGCCCA CGCTGGTCTT CGAAATTGGC TTCGAAGGCA TTCAGGCGAG TCCCCGTCAT
AAGTCCGGCG TAGCGGTGCG TTTTCCGCGC ATGCTGCGCT GGCGGACCGA TAAACATATC
GACGACGCCG ATACGTTGGC GATGCTAAAG GGCTTCATCG ACGATCGTGC GGGATAA
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| Protein sequence | MKRFAALYTA LDATTSTHDK LEALTSYFAV AEPEDAAWAS YFLAGGKPRQ SVPTRLLTEI
ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRSSELG LTQWIEQRVL TLRGVSPEEL
RTRLLSYWDE LDWGGRFLLT KLIGGGFRVG VARQLVVRAL AEVAGVDHKR IAQRMVGWTD
SQQKPDAARY LRLIAPEATG DETQAGDHPH ESDLGLPYPF FLAHPLQADP ATLGDPSQWQ
IEWKWDGIRA QLVKRGGRVW LWSRGEDLIT DRFPEVAALG EALPDGFVVD GEILAWERGD
MAPLPFARLQ PRIARKTLTK KILADSPATL LAYDLLEARG QDLRMTPLVE RRARLEALAV
SIEGTLAQDL LRVSPLVDAV DWQALAALRD ESRARGVEGL MVKQRESMYG VGRTKASGTW
WKWKIDPYAI DAVLLYAQRG HGRRASLYTD FTFAVWDEAN GVRTLVPFAK AYSGLTDEEM
RQVDAIVRKT TIEKFGPVRS VTPTLVFEIG FEGIQASPRH KSGVAVRFPR MLRWRTDKHI
DDADTLAMLK GFIDDRAG
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