| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5289 |
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| Symbol | |
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| ID | 6279061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1467580 |
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| End bp | 1469796 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616375 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001889018 |
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| Protein GI | 187919987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCC AGGCCAACTA CTCGTCGCGC ATCGCGGAGG GCACCCCTTT TCCGCTCGGC
GCGACATGGA ACGGGAGCGG TGTCAACTTC GCGCTGTTCT CGGCGCACGC CACCAAGGTC
GAATTGTGTC TGTTCGATGA AACAGGCGAA AACGAAATTG AACGCATCGA ACTGCCGGAA
TATACCGACG AGGTGTGGCA TGTGTTCGTG CCAAACCTCA AACCGGGCGC GGTGTACGGC
TATCGCGTGC ATGGCCCTTA TGAACCCGAG AAGGGCCATC GCTTCAATCC GAACAAGCTG
CTGCTCGACC CCTATGCGAA GGCGCATATC GGCGAGCTCA AATGGGCGCC GGAAATCTTC
GGCTATACGC TGGATTCCGA AGAGGGCGAC CTGTCTTTCG ACGAGCGCGA CAGCGCGCCC
TTCGTGCCGA AGTGCAAGGT GGTCGACGCC AATTTTTCGT GGAGTCATCC CGAGCGCAAC
GCGCTGCCGT GGGAGCGCGT GATTTTTTAT GAAGCCCACG TGCGCGGATT TACCAAACGG
CATCCGGAAG TACCGGAAAA TCTGCGCGGC ACGTTCGCCG GACTTGGGCA ACAGGTCGTG
CTCGACTACA TCAGGAACCT CGGCGTGACG TCGGTCGAAC TCATGCCGAT TCAAACTTTC
GTGAACGACA GCTATCTGCT CGATAAAGGC CTCACTAATT ACTGGGGTTA CAACACCATC
GGTTTCTTCG CGGCCGATCC GCGTTTCTTC GCCTCGTCGA TCGATTCGGT GGGCGAGTTC
AAGGAGATGG TGGACCGCTT TCACAACAAC AATCTCGAAG TCATTCTCGA CGTGGTCTAC
AACCACACCG CGGAAGGCAA TGAGCGTGGC CCGACGATCT CGTTCAAGGG CATCGACAAC
GCGTCGTACT ATCGCCTGAT GCCCGACGAG CCGCGCTACT ACATCAACGA TACCGGCACC
GGCAACACGC TGAACCTCTC GCATCCGCGC GTGCTGCAGA TGGTGACCGA CAGCCTGCGC
TACTGGGTGA CGGAAATGAA GGTGGACGGT TTCCGTTTCG ATCTCGCGAC GATTCTCGGC
CGCGAACTGC ACGGCTTCGA CGAGGGCGGC GGTTTCCTCG ACAGTTGCCG GCAGGACCCG
GTGCTCTCGA GCGTGCGGCT GATTGCCGAG CCGTGGGACT GCGGCCCGGG CGGCTATCAG
GTCGGCGGCT TTCCGCCCGG CTGGGCCGAG TGGAACGACC GCTTTCGCGA CACGGTGCGC
GAATACTGGA AGGGCGACGA AGGCAAGGTC GCCGATCTCG CTACGCGCCT CACCGGCTCG
GGCGACAAGT TCAATCATCG TGGCCGGCGC CCGTGGGCCA GCGTGAACTT CATCGCCGCG
CACGATGGCT TCACGCTCAA CGATCTGGTT TCATACAACG ACAAACACAA CGAAGCCAAC
GGCGAGGACA ACAAGGACGG CCACTCGGAC AACAAGTCCT GGAACATGGG CGTGGAAGGT
CCGACCGACG ATCCGGAGAT TCGTCAACAG CGCGAGCGCC AGAAACGCAA TCTTCTGGCC
ACGTTGCTGC TCTCGCAAGG CACGCCGATG ATTCTCGCGG GCGACGAATT CGGCCGCACG
CAACAGGGCA ACAACAACGC CTATTGCCAG GACAACGAGA TCAGTTGGGT GGATTGGGAA
GCCATCGACG ACGACGGCCG CGCGCTTACC GAGTTCGTCA AGAATCTGAC CACGCTGCGT
CATCGTCTGC CGGTATTGCG GCGTGGCCGC TTTATCATCG GTGAATACAA CGAGGCGTTG
GACGTGACCG ACGCGCGCTG GCTCTCGCCG GACGGCACGG ATCTCTCGCA GGAGCAGTGG
GACGATCCGT CGATGCGCTG CTTCGGCCTC GTGATCGACG GCCGCGCGCA GGCGAGCGGC
ATTCGCCGGC CGGCCTCGGA CGCGACCTTG CTGCTGGTGT TGAATGCGCA TCACGATGTC
GTCAACTTCA CGCTGCCGGA CGTTCCCGAG GGCGACCGGT GGACCTGCCT GGTCGACACC
AACATGCCGG TGCGTTCCGA ATTGCCGCAG TTCAGTGCCG GCGACGCGTA TCAGGTGACG
GGGCGCTCGC TCCTTCTGTT CGCCCTAGAC GCACCGAACC GCGCGACGCA GCGTGTCTTC
GACCGCCTCG AAGAGCAGCT CACCACTGAC GAAAGCGAAC CCTCCGCCGG AGCGTGA
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| Protein sequence | MSFQANYSSR IAEGTPFPLG ATWNGSGVNF ALFSAHATKV ELCLFDETGE NEIERIELPE
YTDEVWHVFV PNLKPGAVYG YRVHGPYEPE KGHRFNPNKL LLDPYAKAHI GELKWAPEIF
GYTLDSEEGD LSFDERDSAP FVPKCKVVDA NFSWSHPERN ALPWERVIFY EAHVRGFTKR
HPEVPENLRG TFAGLGQQVV LDYIRNLGVT SVELMPIQTF VNDSYLLDKG LTNYWGYNTI
GFFAADPRFF ASSIDSVGEF KEMVDRFHNN NLEVILDVVY NHTAEGNERG PTISFKGIDN
ASYYRLMPDE PRYYINDTGT GNTLNLSHPR VLQMVTDSLR YWVTEMKVDG FRFDLATILG
RELHGFDEGG GFLDSCRQDP VLSSVRLIAE PWDCGPGGYQ VGGFPPGWAE WNDRFRDTVR
EYWKGDEGKV ADLATRLTGS GDKFNHRGRR PWASVNFIAA HDGFTLNDLV SYNDKHNEAN
GEDNKDGHSD NKSWNMGVEG PTDDPEIRQQ RERQKRNLLA TLLLSQGTPM ILAGDEFGRT
QQGNNNAYCQ DNEISWVDWE AIDDDGRALT EFVKNLTTLR HRLPVLRRGR FIIGEYNEAL
DVTDARWLSP DGTDLSQEQW DDPSMRCFGL VIDGRAQASG IRRPASDATL LLVLNAHHDV
VNFTLPDVPE GDRWTCLVDT NMPVRSELPQ FSAGDAYQVT GRSLLLFALD APNRATQRVF
DRLEEQLTTD ESEPSAGA
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