Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5266 |
Symbol | |
ID | 6279324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1445724 |
End bp | 1446296 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642616352 |
Product | Lipocalin family protein |
Protein accession | YP_001888995 |
Protein GI | 187919964 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.940719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTAC GCCGACAATC GGTGCTGCGC GTCAGCACCC TTTCACTTGC GCTTGGCGCG GTGTGCCTGC TCGGCGCCTG CGCGCTCAGT CCAGCCGGCA AGAGCGGCAA TGCGCATGTG CCCGAGCCCG CCAAGCCGGT CGACCTGAGC CGCTATGTCG GCCGATGGTA CGAACTGGCG CGCTATGAAA ACGGCTTCGA ACGCGATTGC GAAGCGGTCA CCGCCGAGTA CGCCACGCGC GACGACGGCC TGATCGACGT CACCAACAGT TGCCATAAAG GCGGCGTGAA CGGAGCGCTC GACGTGTCGA AAGGCCGCGC GAAAATGGTC GCCGGCTCGC AGAATGCCAG GCTGAAGGTG TCGTTCTTCG GACCGTTCTT TTTCGGCAAC TACTGGGTGC TCGATCACGC GGACGACTAT AGCTGGTCGA TCGTCGGCGA GCCCAGCGGC CGTTATCTAT GGATTCTCAC GCGCGAGGCC ATCCCCGCCG CGAGCGTGAA GGACGCGCTG ATCGAGCGGG TTCGCGCGCT CGGCTACGAC ACGTCCATGC TGCGCATGAC CCGGCACGAG TGA
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Protein sequence | MALRRQSVLR VSTLSLALGA VCLLGACALS PAGKSGNAHV PEPAKPVDLS RYVGRWYELA RYENGFERDC EAVTAEYATR DDGLIDVTNS CHKGGVNGAL DVSKGRAKMV AGSQNARLKV SFFGPFFFGN YWVLDHADDY SWSIVGEPSG RYLWILTREA IPAASVKDAL IERVRALGYD TSMLRMTRHE
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