Gene Bphyt_5266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5266 
Symbol 
ID6279324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1445724 
End bp1446296 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content64% 
IMG OID642616352 
ProductLipocalin family protein 
Protein accessionYP_001888995 
Protein GI187919964 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.940719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAC GCCGACAATC GGTGCTGCGC GTCAGCACCC TTTCACTTGC GCTTGGCGCG 
GTGTGCCTGC TCGGCGCCTG CGCGCTCAGT CCAGCCGGCA AGAGCGGCAA TGCGCATGTG
CCCGAGCCCG CCAAGCCGGT CGACCTGAGC CGCTATGTCG GCCGATGGTA CGAACTGGCG
CGCTATGAAA ACGGCTTCGA ACGCGATTGC GAAGCGGTCA CCGCCGAGTA CGCCACGCGC
GACGACGGCC TGATCGACGT CACCAACAGT TGCCATAAAG GCGGCGTGAA CGGAGCGCTC
GACGTGTCGA AAGGCCGCGC GAAAATGGTC GCCGGCTCGC AGAATGCCAG GCTGAAGGTG
TCGTTCTTCG GACCGTTCTT TTTCGGCAAC TACTGGGTGC TCGATCACGC GGACGACTAT
AGCTGGTCGA TCGTCGGCGA GCCCAGCGGC CGTTATCTAT GGATTCTCAC GCGCGAGGCC
ATCCCCGCCG CGAGCGTGAA GGACGCGCTG ATCGAGCGGG TTCGCGCGCT CGGCTACGAC
ACGTCCATGC TGCGCATGAC CCGGCACGAG TGA
 
Protein sequence
MALRRQSVLR VSTLSLALGA VCLLGACALS PAGKSGNAHV PEPAKPVDLS RYVGRWYELA 
RYENGFERDC EAVTAEYATR DDGLIDVTNS CHKGGVNGAL DVSKGRAKMV AGSQNARLKV
SFFGPFFFGN YWVLDHADDY SWSIVGEPSG RYLWILTREA IPAASVKDAL IERVRALGYD
TSMLRMTRHE