Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5250 |
Symbol | |
ID | 6280330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1429117 |
End bp | 1429917 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616336 |
Product | isochorismatase hydrolase |
Protein accession | YP_001888979 |
Protein GI | 187919948 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC ACGACGCATA CGGCACAAGC GTTTCCGGTC AGTTGGGCCG CGACGGCCGG CCTCGCTGGA GCGCGAGTGA AACGCTCGTC GACATGTCGT TGCCCGCGCC TGAACCCGTC GTCGCGACAC TGCCGTGCGA GCCGCAAAAT GTCCGTATCG ATCTGCGCAG CACGGCCATT ATCGTGATCG ACATGCAGAA CGACTTCTGC ACCAACGGAG GTTGGGTTGC CCAGATTGGG GGCGATTTCG CGGTCGACCG CGCGCCGATT GCACCATTGC AGCGCTTGCT GCCGGTGCTG CGCAAAAGCG GCGTGCCGGT CATCTGGGTC AATTGGGGCA ACCGGCCCGA CCTCGCCAAC ATGCCGCCGA ATCAGTTGCA TCTATATAAG CCGACGGGAA CGGGAACCGG CTTGGGCGAG CCGCTCGCGA GCAACGGTTC GCACGTGCTC GAAAAGGATT CGTGGGCCGC GGCGGTGGTC GATGAACTCG CGCCGCTGCC GCAGGACATC TGCGTGGACA AGTACCGGAT CAGCGGCTTC TGGGACACGC CGCTCGACAG CATCCTGCGC AACCTCGGCA TTCGCACCGT GCTGTTCGCG GGCGTGAATA CCGATCAGTG CGTGCTGCAT TCGCTCACCG ACGCCAACTT CCTCGGCTAC GGTTGCGTGC TGGTGGAAGA CTGCTGCGCG ACGTCGTCGC CGGACTTCTG TACGGAAGCG GCCGTCTGGA ACGTGAAGAA GTGCTTTGGC TTCGTCACGG ATTCCGCGCG AATCGTCGAT GCCTTGTCGG ACGCCGCATG A
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Protein sequence | MKQHDAYGTS VSGQLGRDGR PRWSASETLV DMSLPAPEPV VATLPCEPQN VRIDLRSTAI IVIDMQNDFC TNGGWVAQIG GDFAVDRAPI APLQRLLPVL RKSGVPVIWV NWGNRPDLAN MPPNQLHLYK PTGTGTGLGE PLASNGSHVL EKDSWAAAVV DELAPLPQDI CVDKYRISGF WDTPLDSILR NLGIRTVLFA GVNTDQCVLH SLTDANFLGY GCVLVEDCCA TSSPDFCTEA AVWNVKKCFG FVTDSARIVD ALSDAA
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