| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5244 |
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| Symbol | |
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| ID | 6278326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1421370 |
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| End bp | 1423226 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616330 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_001888973 |
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| Protein GI | 187919942 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTCA AAGGTCTGCT CGCGGCATAC GCGGCAGGCA GCCTCACGCC GACCGAAGCC
GTGTTGTCGG CGCTGGCGCG AATCGAAGCC AGCAATCGCC CGGAAGCCTG GATTCTGCGT
GTGCCGGCAG CCGACGTGCA GGCTCGCGCG AAGGCGCTCG AAGCGTTATA CGACGCACAG
GGGAGCGCGG TGTTCGAGCA CATGCCGCTG TTCGGCGTGC CGTTCGCCGT CAAGGACAAT
ATCGACGTTG CCGGCTTGCC GACTACGGCC GCTTGCGACT CTTTCGCCTA CACGCCGGAC
ACGTCGGCAT TCGCCGTGCA GCGGCTCATC GACGCCGGCG CCATCCTGAT CGGCAAGACC
AATCTCGATC AGTTCGCCAC CGGCCTTGTC GGCACGCGTT CACCGTATGG CGCCGTGCGG
CACAGCGAGT CGCCGCTGCG CGTGTCGGGT GGTTCGAGTT CGGGCTCGGC AGTCGCGGTG
GCGACGGGTT GCGTGGCGTT TTCGCTCGGC ACCGACACCG CGGGCTCTGG CCGCGTGCCG
GCCGGATTCA ACGGGCTGGC CGGTCTGAAA CCTTCGCTGG GACTGGTCAG CAAACGTGGC
GTGGTGCCCG CGTGCCGAAG CCTCGATACG ATCTCCGTGT TCGCGCACGA CGTCGACGAT
GCGTGGCGCG TGCTCTGCGA AATCGCCTGC TTCGATTCGC TCGACGGTTA CTCGCGCAAG
GTGCCGAGCC TTGGCCTGCT GCGTTCGGTT CCGCGCATCG GTGTGCCGGA GCGACTGGAG
TTTTATGGCG ACGCCATCGC GAGCCGGGCG TTTGCAACCG CGCTAGACAC GCTCACCACG
CACCTGCATC TGCCGACGCA AGCAATCGAC TTCGAGCCGC TCAAAGCGGT CTCGGCCTTG
CTCTACGACG GCCCGTGGGT CGCGGAACGG CGCGCGGCGC TCGGCACGTT TTTCGAAACC
CATCACCAGG CGATCGATGC GGTCGTGGCC AAGGTGATCG GCAAGGCCGA GCAGTTCAGC
GCCGCCGATG CCTTTAACGG CCAGTACGCG CTGGCCGATC TGAAACGTCA TGCCGAAGCG
CTCTTCGAAA CCATCGACAT CCTGATCGTG CCCACCACGC CGACGCATCC GTTGATCGCC
GACGTGCAGG CCAATCCTAT CGAATTGAAC AGCCAGCTCG GCTACTACAC CAACTTCGTC
AACCTGCTCG ATCTATGCGC GCTGGCCGTG CCGTGTCAGC GGCGCAGCGA CGGCTTGCCG
GCCGGCGTGA CGCTGATCGC GCCGAGCGGC GCGGACCGGC GCCTCGCCGA ACTCGGCGCG
CGGATTCAGG CGTTGTTCGC GAACGGCACC GAAACCGCGG AGGCCGTAAC AACAGCCGCG
CTCATCCAGC CGCTGCCGTT TCAGGAATCC ACCGTCACCC TCGCGGTGGT CGGCGCGCAT
CTGCGCGGCC AGCCGTTGAA CTGGCAACTC CAGCAAGCCG GCGCGCGTTT CGTGAAAGCG
ACGCACACCG CACCAGGCTA CAAGCTCTAC GCACTCGCCA ACACCCAGCC GCCGAAGCCC
GGCCTCGTGC GTTCAACGGA ACAGCACGGC CAGCCAATCG CCATCGAACT CTGGGAAGTG
CCGCTGCGCA GTTTCGGCCA ATTCGTCGCC GACGTGCCCG CGCCGCTCGG CATCGGCACG
TTGCAACTCG CCGAAGGCCA CAGCGCGAAA GGCTTCATCT GCGAGCCGTC GGCGGTGAGC
GAGGACAGCG GCGCGCGCGA CATCACGTTG TTCGGCGGCT GGCTTGCGTA CCTCGCGAGC
CTCAAAGCCA ACCCCAAGGC CAATCCGCAA GCCGATACCC AGACCAACGC TCTTTAA
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| Protein sequence | MTVKGLLAAY AAGSLTPTEA VLSALARIEA SNRPEAWILR VPAADVQARA KALEALYDAQ
GSAVFEHMPL FGVPFAVKDN IDVAGLPTTA ACDSFAYTPD TSAFAVQRLI DAGAILIGKT
NLDQFATGLV GTRSPYGAVR HSESPLRVSG GSSSGSAVAV ATGCVAFSLG TDTAGSGRVP
AGFNGLAGLK PSLGLVSKRG VVPACRSLDT ISVFAHDVDD AWRVLCEIAC FDSLDGYSRK
VPSLGLLRSV PRIGVPERLE FYGDAIASRA FATALDTLTT HLHLPTQAID FEPLKAVSAL
LYDGPWVAER RAALGTFFET HHQAIDAVVA KVIGKAEQFS AADAFNGQYA LADLKRHAEA
LFETIDILIV PTTPTHPLIA DVQANPIELN SQLGYYTNFV NLLDLCALAV PCQRRSDGLP
AGVTLIAPSG ADRRLAELGA RIQALFANGT ETAEAVTTAA LIQPLPFQES TVTLAVVGAH
LRGQPLNWQL QQAGARFVKA THTAPGYKLY ALANTQPPKP GLVRSTEQHG QPIAIELWEV
PLRSFGQFVA DVPAPLGIGT LQLAEGHSAK GFICEPSAVS EDSGARDITL FGGWLAYLAS
LKANPKANPQ ADTQTNAL
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