| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5227 |
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| Symbol | |
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| ID | 6279126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1401552 |
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| End bp | 1403006 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642616313 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_001888956 |
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| Protein GI | 187919925 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.235353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCC ACGACGATCT GTTCCAGTCC ATGTCGATCG AAGCGCTGCG GGCGCGCTAT
CGCGCCGGCA GCCTCACGCC GGCGCAACTG GTGGAAGCCG TCGCCGCGCG CACTTCGGGC
GACGATCCGC ATCGCGCATG GATCCGCCCG TTGAGCCGCA ACGAGATGAT TCGTTACGTC
GACGCGCTCG AAGGCCGCGA CATCGACACG TTGCCGCTCT ACGGCGTGCC GTTCGCCATC
AAGGACAATA TCGACCTGGC CGGCATTCCG ACCACCGCCG CGTGCCCCGC ATATGCGTAC
ACGCCTGAGG CCAGTGCGCC GGTAGTCGCG CGCCTGATCG CGGCCGGTGC GATTCCGATC
GGCAAGACGA ACCTGGATCA GTTCGCGACC GGTTTGTCCG GTCAGCGCTC GCCGCACGGT
GCCTGCCGCA ACGCGCTAGA TCCGCGCTAT GCATCGGGCG GATCGAGTTC CGGTTCGGCG
GTATCGGTCG CGCTCGGGTT GGCGGCGTTT TCGCTGGGCA CCGACACGGC CGGATCGGGA
CGCGTGCCCG CGGCATTCCA CGGCCTGCTC GGACTGAAGC CGACCAAGGG CGTGTTGAGT
ACGCTCGGCG TGGTGCCGGC GTGCAAATCG CTCGACTGCG TGTCGATCTT CGCGCGCTCG
GCGGACGACG CGCAGTGCGT GTTCGACGCC GCGCGCGGCG TGGCGCCGAG CGATCCGTAT
GCGCGCGAAT TCCAGCCGCC GACGGGCGCC GCGCAGCTTG GCGCGCAACC GTCGCTGCGC
GGTGTGCGCT TTGGCGTGCC GCGCGCAAAT CAGCTCGAAT TTTTCGGCGA CACCTCGTAC
GCGCATGCTT TCGATGCCGC GCTGACGCGC CTGCGCGCAG CCGGCGCCGA ACTGGTCGAG
ATCGACTTCG AGCCGTTCCT CGCCACCGCG CGGCTGCTCT ACGAAGGACC GTGGGTAGCG
GAGCGGCTCG CGGCGATCCG CGAGTTCGCC GACACGCAGC CCGACGCGCT GCATCCGGTG
ATCCGCGAGA TCATCGGCGG CGCGGCGCGC TGGAGCGCGG CCGATGCGTT CGCCGCGTTC
GACCGCCTCG CGTTCCTGCG CATGCAGGCG GCGCACGTCT GGCAGCGGAT CGACGCCATC
GTCACGCCGA CCTCGGCGAC CACCGCCACC GTCGACGAAC TGGAAGCGGA CCCGATCCGC
GTGAATTCGC GCTTTGGCTA CTACACGAAC TTCGTCAACC TGCTCGATCT GGCCGCGCTG
GCGGTGCCGG CCGGCGTCTG CACGGTCGGC CGGCATGCGG GCTTGCCGTT CGGCGTGACC
TTCGTCGCGC GCGCACACGA AGACAGGGTG CTGCTCGATC TGGCGCGCGC GTGGCTCGAC
GAAACGACCG CCGCGTCAAG GTCCGCATAC GACGCAACCG CAGTCCGCCT CGGAGAATCA
CATGGCCGTC ATTGA
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| Protein sequence | MKSHDDLFQS MSIEALRARY RAGSLTPAQL VEAVAARTSG DDPHRAWIRP LSRNEMIRYV
DALEGRDIDT LPLYGVPFAI KDNIDLAGIP TTAACPAYAY TPEASAPVVA RLIAAGAIPI
GKTNLDQFAT GLSGQRSPHG ACRNALDPRY ASGGSSSGSA VSVALGLAAF SLGTDTAGSG
RVPAAFHGLL GLKPTKGVLS TLGVVPACKS LDCVSIFARS ADDAQCVFDA ARGVAPSDPY
AREFQPPTGA AQLGAQPSLR GVRFGVPRAN QLEFFGDTSY AHAFDAALTR LRAAGAELVE
IDFEPFLATA RLLYEGPWVA ERLAAIREFA DTQPDALHPV IREIIGGAAR WSAADAFAAF
DRLAFLRMQA AHVWQRIDAI VTPTSATTAT VDELEADPIR VNSRFGYYTN FVNLLDLAAL
AVPAGVCTVG RHAGLPFGVT FVARAHEDRV LLDLARAWLD ETTAASRSAY DATAVRLGES
HGRH
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