Gene Bphyt_5223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5223 
Symbol 
ID6277326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1397346 
End bp1398806 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content67% 
IMG OID642616309 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001888952 
Protein GI187919921 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCC GCTCTCTCGC CGCGGCGCTG GCACTGGCGT TCGGCGCCAC CACGCTGACG 
GTTTTCGTGC TGGTCGGCAG TTTCCTGTAT GTCGCGCTCG AAAAGCAGAT CAAGGCGCAG
GACAATCTCG ACATCGTGCT CGCCGCGCGT CACGCACGGC GCCTCGCCGA GGAGCTGGAC
TCGGCGCAAA GCATTCGCGA CCACAGCGAG CGCCTGACTA GCGTCGTGCT CGGCAACGAA
GCGCTGTCGA TGGAAGTGTT CGATCCCGAT GGCAAGCGGG CGATCGAACA CAATATCGCC
GGCGCGCTCG CCGTGCCGGA TACGGCGAGC GGCGCCGCGA CCATTGCGGC GCTGCCGCCG
CTCACGCGTG TTGCCGCGAC CACGCGAATC ACGGAAGCCG ATATCGGCGA CTGGACCAGC
CGCAACGGCG CGCCGATCCG CGGCATTTTC ACGGACGCGA GGCTGCGTAA CGGCGACACG
GCGAGCCTGC TGGTGGCGCG CAACATGAGC GACCGCTGGC TGCTGCTGGA CCGCTACCGC
GACAAGCTCA CGCTCGCGGG CGTGGCCGGC GTGGTGCTGG CCATGCTGCT CGGTTACCTG
CTGATTCGCG CCGCGCTGCG GCCGTTGCGC GATATCGCGG CGAGCGCGAG CCTCGTCACG
GTGAATCGGC TCGACACGCG CATCGCGGTG GCGCGCGTGC CGAGCGAACT CGAAGCTTTG
GTGGCCTCGC TGAACGCGAT GCTCGAACGC GTCGAGCAGG GTTTCCAGCA TCTGTCGCGT
TTCACCGCCG ACCTCGCGCA CGACATGCGC ACGCCGCTCA GCAACATGCG CGGCGCCGCC
GAAGTCGCGC TCGCGCGGCC GCGTTCAGTC GACGAATACG AAGCGCTGCT CGCGTCGAAT
CTGGAAGAGT GCGACCGGCT CTCGCGCATG ATCGAGAGCG TGCTGTTTCT GGCGCGCGCC
GAACACCCGC AGTTCGTCAA GCAATTGCGC GAGTTCGACG CGGGGCAGGA GCTGACGCAT
ATCGCCGAGT ATTTCGAAGG TATTGCCGAC GATGCGAATG TACGTTTGCG CGTGAGCGGC
GCGGCTACGG TGACTGCCGA TCTCGAGTTG TTTCGCCGCG CCGTGAGCAA TCTGCTCGCC
AACGCCATTC GCTATACGCC GCGGGGCGGC GAGATCGTGC TGGACGCCGG CGCGTCGGCC
GACGCGGTGC GCGTGACCGT GGAGAACCCG GGGCAGCCGA TTCCCGCCGA GCATCTCGAG
CGTATTTTCG ACCGCTTCTA TCGGGTCGAT CCGTCGCGCA GTTCGCTGCC GTCGGCGGGG
CTGTCGCAAG GGTCCACGGG TTCGACCGGG CTCGGGCTTG CCATCGTGCG CGCGATCATG
GAACTGCACG GCGGCTCGGT GCATGCGGAG AGCGATGCGC GCGGGACGCG CTTCGTGCTG
AGGTTTCCGC GGGTGATGTG A
 
Protein sequence
MRGRSLAAAL ALAFGATTLT VFVLVGSFLY VALEKQIKAQ DNLDIVLAAR HARRLAEELD 
SAQSIRDHSE RLTSVVLGNE ALSMEVFDPD GKRAIEHNIA GALAVPDTAS GAATIAALPP
LTRVAATTRI TEADIGDWTS RNGAPIRGIF TDARLRNGDT ASLLVARNMS DRWLLLDRYR
DKLTLAGVAG VVLAMLLGYL LIRAALRPLR DIAASASLVT VNRLDTRIAV ARVPSELEAL
VASLNAMLER VEQGFQHLSR FTADLAHDMR TPLSNMRGAA EVALARPRSV DEYEALLASN
LEECDRLSRM IESVLFLARA EHPQFVKQLR EFDAGQELTH IAEYFEGIAD DANVRLRVSG
AATVTADLEL FRRAVSNLLA NAIRYTPRGG EIVLDAGASA DAVRVTVENP GQPIPAEHLE
RIFDRFYRVD PSRSSLPSAG LSQGSTGSTG LGLAIVRAIM ELHGGSVHAE SDARGTRFVL
RFPRVM