| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5216 |
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| Symbol | |
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| ID | 6277462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1391669 |
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| End bp | 1392490 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642616302 |
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| Product | type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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| Protein accession | YP_001888945 |
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| Protein GI | 187919914 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG CACTGATCAT GCTGCCGTTT CTATTTCTCA TTGGCTGCAA ATCGTCGTTA
TTCGAAGGCC TGGAAGAGGA CCAGGCGAAC CAGATTATCG CCGTCCTTAG CCAGCATGGG
ATCGAAGGTG TGAAGGACCG CAGCGCCGAC AAGAAATGGA ACGTCTCAGT CGATGTCGAT
GATGTGGTGA GCGCAACCGA AATCACGCGC GAATATGCGT TGCCTCGCGA CAATCATGCA
AATCTCGGTG ATCTCTTCAG CCGACAGGGG TTGATATCGA ATCCCGACGA AGACCGGGTG
CGCTATGTCT ACGGTTTGAC GCAAGAGCTA TCGGAAACGC TCGAGAAGAT CGACGGAGTG
CTGGTGGCAC GCGTGCATAT CGTGCAACCA GAGCGCGACC CGCTGATGCG GCAGGTCGCG
CCACCCTCGG CATCGGTGAT GCTGCGCTAC CGCAGCGACT ACAACCTCGA ATATATGAGG
GACAAGATCC GCAACCTCGT TGCGGGCAGC GTCGAGGGTT TGACGCCCGA CCGCGTGTCT
CTGACGTTTA TTCCCGTCAC ACCCGTTGCC GAGCCCGCCG ACGCCAAAGG CGACGCCAGG
ACGCACTTCG CGATGCCCGC TGTCGAAACG CGTCACGACA CCACACTGAT GCTCATCGTC
GTAGCGGTAA TGGCGATCTT GCTGATCGTA TCGGCGTGGG TGTGGAAAAG CGGCATTCGC
TCGTTTGCAC GGGCATTCTA TCGCCGAAGA AAGCCCACCA CGGCGACTGA AGCGCATCCA
GACGAAAAGC CGGGCAACTC CGGCCAAGGA GACGCACCAT GA
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| Protein sequence | MRLALIMLPF LFLIGCKSSL FEGLEEDQAN QIIAVLSQHG IEGVKDRSAD KKWNVSVDVD
DVVSATEITR EYALPRDNHA NLGDLFSRQG LISNPDEDRV RYVYGLTQEL SETLEKIDGV
LVARVHIVQP ERDPLMRQVA PPSASVMLRY RSDYNLEYMR DKIRNLVAGS VEGLTPDRVS
LTFIPVTPVA EPADAKGDAR THFAMPAVET RHDTTLMLIV VAVMAILLIV SAWVWKSGIR
SFARAFYRRR KPTTATEAHP DEKPGNSGQG DAP
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