| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5210 |
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| Symbol | |
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| ID | 6277933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1387751 |
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| End bp | 1388476 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642616296 |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_001888939 |
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| Protein GI | 187919908 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.420892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATT ACATAGGATA CGTCGAGGGC TTTGCCTTTT GCACCATCCG CCCAGTGGTT
GCGCTATCGC TCGTTCCATT TGGCGGCAGC GAGTCGCTTG GCGTCACTCT GCGGTTGCCA
TTGATGCTGA TGTTCGCGAC ACTGCCGCAG CAAATCGGGT GGCCGGCCGA CCCGATCGTC
GCCGCCTCGG TCGAAGTGCT AGTCGGGTTG CTACTCGGTC TGTTGCTGAG CGTCGCCTTT
CATGCGGCAG GCGCCGCCGG CGCACTGATC GATCAGCAAG GCGGCTATTC GATCGGCTCC
AGCTACGACC CGAACTTTCG CGACGAATCG GCGCTTTTCG AACGTCTGTT CATCTGGCTC
GCGACATTGA CGTTTTTTAC TGGAAAGGGC CTGCAGGCCG TCTATGGCTT CTTTGCGGAT
GCATGGGTGC TGTGGCCGCC TGGCGCGCCG CGCCCCGATC ACATGCGTGT GATGCGTGAA
CTGGCGGAGC AGCGACTGCC GCTTTCCATG GTGGAGGGCG CGCGAATTGC GATGCCGCTC
ATCGGCATGA TGCTGCTCGT CGATATTTCG ATGGGGTTGA TGTCTCGTTA CGCGAAGCGG
CTTAACCCGT TCACGACCGC ACGCACGGTC AAGGCGATCG TGCTTTCCTT GGTGATTGTC
GCCTGCGTGC CGGTTCTCAT CGAACGTCTC AATGCTCTCT TTCTGCAAGG CGCAATACTC
CAATGA
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| Protein sequence | MTDYIGYVEG FAFCTIRPVV ALSLVPFGGS ESLGVTLRLP LMLMFATLPQ QIGWPADPIV
AASVEVLVGL LLGLLLSVAF HAAGAAGALI DQQGGYSIGS SYDPNFRDES ALFERLFIWL
ATLTFFTGKG LQAVYGFFAD AWVLWPPGAP RPDHMRVMRE LAEQRLPLSM VEGARIAMPL
IGMMLLVDIS MGLMSRYAKR LNPFTTARTV KAIVLSLVIV ACVPVLIERL NALFLQGAIL
Q
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