| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5203 |
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| Symbol | |
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| ID | 6278776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1374937 |
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| End bp | 1376304 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642616289 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001888932 |
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| Protein GI | 187919901 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.755082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATT CATCACTTCC GCCGGAGTTG GGTGGGCAGG CCGAACAGGC AGCCAACGCT
GCTGAAACTC GCGCGCCAGG CGCCGCTCAT GCCGCTGACC CCGCGTCGGC AGCTTCGCCC
GCTCAAGATT CAGAACGCGG CGCGCCCGAG CATGCCACCG CGTCCGCTGA ATCCACGCAT
GACAAACCGG CCGAAGACGC CGTGTCGAAC CGCGAGACGA ACGCCGAACC GCGCCGCCGC
CTCTGGCCGT TCGCGCTGAG CGGACTTGCA GCGGTCCTGC TGATCGTCGG CATCGTGCCG
CGCCTGCATG CGAGCGCCGC GCTGACAGAG CAGACACAAG CGCAAAGCAT GCTCAGCGTG
TCGGTGGTCG CGCCGCACGC TGCGCCGGCG GTCAACGAAC TGCTGCTGCC CGGTTCCGTC
ACGCCGTTCG CCGAAGCCTC CATCTATACG CGCACCACCG GCTACCTTGC ACACTGGAAC
ACCGACATCG GCGCGCAGGT GAAAAGCGGC CAGGTGCTCG CGACGATCGA AGCCCCGGAT
CTGGACGCGC AGCTGCGCCA GGCCCGCGCC GACGAAGCCA CCGCGCAAGC CAATTTCGAC
TACGCGAAGA CCACCGCGCA GCGCTGGCAG GACATGCTCA AGACCCAATC CGTCGCGCAG
CAGGACGCCG ACACCAAGGT CAGCGACATG GAAGCGCGCC GCGCCATGCT GGCGTCGGCG
CAGGCCAATG TCGCGCATCT CGCCGAACTC GTCTCGTACG AAAAGATCAC CGCGCCGTTC
GACGGCGTGA TCACCGCGCG CAACGTCGAC GTCGGCGCGT TGGTGACGGC CGGCGGCACG
CCTGGCGCCG CGGGCATGTC GGGCGAGCTG TTTCATATCC AGCAGAACGG CGTGCTGCGC
GTGTTCGTCG ATGTGCCGCA GAACGACGCG CCGTACGTCA CGCCGGCCAC GGGCGTGTAT
CTGACCGCCC AGCAGTATCC GGGCCGCCGC ATCGCGGCAA AGGTGGCGCG CAGCACCGGT
TCGATCGATC CGTCGAGCCG CACCTTGCGC GTCGAGGTCG ACGTCGACAA CAAGGACGGC
GCGCTGTTGC CCGGCGCTTA CACGCAGGTG CATCTGCAAC TGCAATCGGT CACGCCGGCG
CTCGATCTGC CGGTCAGCGC GCTGCTGTTC AGGCCGGACG GCGTGACGGT CGCCGTGGTC
GACAGCAACG GCCGGGCGCT GCTCAAGACC GTACAGATCG GCCGCGATTT CGGCACGCAC
GTGGAAATCA CGACCGGACT CGCTGCCTCG GACCGCGTGA TCGACAACCC CGGCGATTCG
ATCTCCACCG GCCAGATGGT TCAGATCATG CCGGCCATGC ACGGCTGA
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| Protein sequence | MNDSSLPPEL GGQAEQAANA AETRAPGAAH AADPASAASP AQDSERGAPE HATASAESTH
DKPAEDAVSN RETNAEPRRR LWPFALSGLA AVLLIVGIVP RLHASAALTE QTQAQSMLSV
SVVAPHAAPA VNELLLPGSV TPFAEASIYT RTTGYLAHWN TDIGAQVKSG QVLATIEAPD
LDAQLRQARA DEATAQANFD YAKTTAQRWQ DMLKTQSVAQ QDADTKVSDM EARRAMLASA
QANVAHLAEL VSYEKITAPF DGVITARNVD VGALVTAGGT PGAAGMSGEL FHIQQNGVLR
VFVDVPQNDA PYVTPATGVY LTAQQYPGRR IAAKVARSTG SIDPSSRTLR VEVDVDNKDG
ALLPGAYTQV HLQLQSVTPA LDLPVSALLF RPDGVTVAVV DSNGRALLKT VQIGRDFGTH
VEITTGLAAS DRVIDNPGDS ISTGQMVQIM PAMHG
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