| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5196 |
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| Symbol | |
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| ID | 6277939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1365576 |
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| End bp | 1366586 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616282 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_001888925 |
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| Protein GI | 187919894 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.583001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAG CCCCATTGCA GTCTTCATCG GTCGTCGCGC TGCGCGGCAC ACCGATCGTT
CATCCCGAGC GCAATCCCGG CATGCCGTTC GACGCCTCCT GGCTCGACGG CCTGCGCGTC
AACCAGTCGG CGGTCGAGCG ACGCACGGCC ACGCTCGGCA CGCGCCGCAG CGTCAAGAAA
GATGCGCAGG CGGCCTGGCT GCTCAAAGCC GTCACCTGCA TCGACCTCAC CACGCTCAAC
GGCGACGACA CCGAAGGCCG CGTGCGGCGG CTGTGCGCGA AGGCGCGGCA GCCGGTACGC
GCCGATCTGC TCGAAGCGCT CGGGCTCGCG CCGCAAGGCA TCACGACGGG CGCGGTATGC
GTGTATCACC GCTTCGTCGC GGCGGCGGTC GATGCGCTGC ACGGCAGCGG CATTCCGGTT
GCCGCGGTTT CTACGGGTTT TCCTGCGGGC CTGATTCCGC ATCCGCTGAA GCTGAAAGAG
ATCGAAGCCT CGGTCGCGGA CGGCGCGCAG GAAATCGATA TCGTCGTCAC ACGTGAATAT
GTGCTGACCG GCAACTGGCA GGCGCTCTAC GACGAAGTGC GCGACTTCCG CGCGGCCTGC
GGCCCGGCGC ATCTGAAAAC CATTCTTGCC ACCGGCGACA TTCGCACGCT CTCGAACGTG
GCGCGCGCGT CGATGGTCTG CATGATGGCC GGCGCCGACT TCATCAAGAC ATCCACCGGC
AAGGAAGGCG TGAACGCGAC GCTCGACGTG TCGCTCGTGA TGGTGCGCAT GATCCGCGAA
TACCAGGAAC GCACCGGCGT GCTGATCGGC TTCAAGCCGG CGGGCGGCGT GTCGACTGCG
AAGTCCGTGC TGTCGTATCA GATCCTGATG AAAGAAGAAC TCGGCCGTGC GTGGCTCGAA
CCGGAGCTGT TCCGGATCGG CGCGTCGAGC CTGCTGGCCG ATATCGAACG CCAGCTCGAA
CATTACGTGA GCGGCCGTTA CTCCGCTTTC AACCGTCACC CCGTAGCCTG A
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| Protein sequence | MPEAPLQSSS VVALRGTPIV HPERNPGMPF DASWLDGLRV NQSAVERRTA TLGTRRSVKK
DAQAAWLLKA VTCIDLTTLN GDDTEGRVRR LCAKARQPVR ADLLEALGLA PQGITTGAVC
VYHRFVAAAV DALHGSGIPV AAVSTGFPAG LIPHPLKLKE IEASVADGAQ EIDIVVTREY
VLTGNWQALY DEVRDFRAAC GPAHLKTILA TGDIRTLSNV ARASMVCMMA GADFIKTSTG
KEGVNATLDV SLVMVRMIRE YQERTGVLIG FKPAGGVSTA KSVLSYQILM KEELGRAWLE
PELFRIGASS LLADIERQLE HYVSGRYSAF NRHPVA
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