| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5192 |
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| Symbol | |
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| ID | 6278503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1359802 |
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| End bp | 1360806 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616278 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001888921 |
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| Protein GI | 187919890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.164335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA CTCGACTGGG TGCCGCGCTA GCGGCAGGTG CGCTGACGGT AGGCGTGATC
GCTGCCGCGC AGGCTGCCAC GAACGAAACG ATCGTCACGG TCGTCAAGGT GACTGGCATC
AACTGGTTCA ACCGCATGGA CGACGGCGTC AAGCAGTTCG CCAAGGACAA CCCCAACATC
AACGCGTATC AGACCGGCCC CGGCCGTGCG GACGCGGCGC AGCAACTGAA GATCATCGAA
GACCTGATCG CCAAGAAGGT CACGGCCATC GCCGTGGTCC CCTACGATCC GCCGACGCTC
GAACCCGCGC TGAAGAAGGC GATGGATCGC GGCATCAAGG TGGTCACGCA TGAAGCCGAC
AACGCGAAGA ACACGATGGT CGACATCGAG GCGTTCGACA ACACCGCTTA CGGCGCCGGT
CTGAACGAGC GGCTCGCTTC GTGCATGCAC GACGACGGCA AGTGGGCCGT GCTGGTCGGC
TCGCTCGGCA GCCGCTCGCA GGTGCAATGG GCGGACGGCG GTATCGGCAA CGCCAAGGCC
AAGTATCCGA AGATGAACCT CGTCGAGCCG AAGCTCGAAA CCAACAACGA CGGCGAGCGC
GCCTATGAAG TCGCGAAGGA AGTGCTGCGC AAGCATCCGG ACCTGAAGGG CTTCCAGGGC
TCGTCGTCGC TCGACGTGAT CGGCATTGGC CGCGCGGTGG AAGAGGCCGG CATGCAGGGC
AAGATCTGCG TCTACGGCAC GGGTCTGCCG ACAGAAGCCG GCAAGTTCCT CGAAAGCGGC
GCGATCAACG GCATCGCGTT CTGGGATCCG AAGCTCGCGG GCATCGCGAT GAACAAGGTC
GCGCAGATGC TGGTGGACGG CAAGACGGTC GAAAACGGCG CGGACCTCGG CATTCCGGGC
TACACGAAGG TGACGGTCGC CAAAGGTCCG GGCAAGGGCA TCATCGTGCG CGGGCAGGGC
TGGGTGAACG TCGACAAGTC GAACTATAAG CAGTATCCGT TCTGA
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| Protein sequence | MKLTRLGAAL AAGALTVGVI AAAQAATNET IVTVVKVTGI NWFNRMDDGV KQFAKDNPNI
NAYQTGPGRA DAAQQLKIIE DLIAKKVTAI AVVPYDPPTL EPALKKAMDR GIKVVTHEAD
NAKNTMVDIE AFDNTAYGAG LNERLASCMH DDGKWAVLVG SLGSRSQVQW ADGGIGNAKA
KYPKMNLVEP KLETNNDGER AYEVAKEVLR KHPDLKGFQG SSSLDVIGIG RAVEEAGMQG
KICVYGTGLP TEAGKFLESG AINGIAFWDP KLAGIAMNKV AQMLVDGKTV ENGADLGIPG
YTKVTVAKGP GKGIIVRGQG WVNVDKSNYK QYPF
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