| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5189 |
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| Symbol | |
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| ID | 6278102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1356288 |
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| End bp | 1357013 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616275 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_001888918 |
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| Protein GI | 187919887 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAAAC CCGACCGCCT CCGCGCCCTA GCCGATGCAC TGGGCCGGCA AAACGTCATG
CGCCTGCGCG ACGCCGCCGG CCTGCTGGGC GTTTCGGAAA TGACTGTGCG GCGCGACATC
GCAGGCAGTC CCGAGCGATT CACTTATCTC GGCGGCTATA TCGTCAGCGC GACCGACGTC
CCCAATAACG CCGGCTACTC GCTCGAAGAA GAGAAAGACC ACTTCGCGCA GGCCAAGGCC
GAGGCGTCGG CGATCGCGGC GGGACTCATC GGCAACAACG AGACGCTGTT CATCGACTGC
GGCACGACGC TCACCACACT GGCCAGGCTG ATTCCGGTCG AGCGGCATGT CACGGTGGTG
TGCTATTCGC TGAACGTCGC GGAGATTTTG CGGCGCAAAC CCAATGTGCG AATGATTCTG
CTGGGCGGCG TTTATGTGCC TTCATCAGAT TCGTTCGCGG GCGAGGAAAG TCTGGAGATG
TTGCGCCGCA TGGGCATCAA CAAGGCGTTC ATTTCAGCCG GCGGCGTGGA CGCGGCGCGC
GGCGTGACGT GCTGGAATTT TCATGAGGTC GCGCTCAAAC AGGCGGCCAT GGCGAGCGCG
GTCGAGCGGC ATCTGGTGGT GGACCAGAGC AAGTTCGGCA TGGTGAAAGC CGTGCGTTTC
TCGCAAGTGG ACGACTTCGA CTCCATCATC ACCGAGAAAG GCCAGGAGCA TCGCAAGCGC
CGTTAG
|
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| Protein sequence | MLKPDRLRAL ADALGRQNVM RLRDAAGLLG VSEMTVRRDI AGSPERFTYL GGYIVSATDV
PNNAGYSLEE EKDHFAQAKA EASAIAAGLI GNNETLFIDC GTTLTTLARL IPVERHVTVV
CYSLNVAEIL RRKPNVRMIL LGGVYVPSSD SFAGEESLEM LRRMGINKAF ISAGGVDAAR
GVTCWNFHEV ALKQAAMASA VERHLVVDQS KFGMVKAVRF SQVDDFDSII TEKGQEHRKR
R
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