Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5167 |
Symbol | |
ID | 6277522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1333684 |
End bp | 1335096 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642616254 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001888897 |
Protein GI | 187919866 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGCA CCGATAGCCC AACCGTAAGC CCTGTAAGCG CCGGTGCACG TCTCGACCGA TTGCCGATCT CGCGCTTTCA CAAGCGCGTA CTGTGGCTGA TCGGCGGGGG CATGTTCCTC GATTCGTTCG ACATTTACCT TGCCGGCGGC GTGCTCGGCG CGCTCGCAAA GACCGGCTGG TCGACAATGA ACCTGAACGC GGCATTCCTG TCGTCGACGT TCATCGGGAT GTTGATTGGC GCTTTTACCG CCGGCGTGCT GGGTGACGCG AAAGGCCGCA AGTTTACGTA TCAATTCAAT CTCGCCATGT TCGGTCTGGC GTCGATCGCC GGCGCGTTTG CGGCGAACAT GACGTGGCTG ATTGTGTGCC GCTTTTTCAT GGGCCTCGGC CTCGGTGCGG AGATCGTCAT CGGCTACGGA TCGATCGGCG AATTCATGCC GCCCGCCGTG CGCGGAAAAT GGTCAGCGTA TCTGTCGCTC ATCACCAACT CGGCGCTGTT CTTCTCGACC TTCCTCGGCT ATCTGGTCAT TCCGTCGATC GGCTGGCGCG CCATGTTCGC GGTCGTCGGC GCCGGCGCGA TGGTCGTGTG GGTCCTTCGC AAGAAGATGC CCGAGTCACC GCGCTGGCTC GAATCGAAAG GCCGTTACGC GGAAGCCGAA GCGATCCTGC GCGCGGCTGA GGAGGAATCG GCGCGCAATT CAACGTTGCC GCCCGTCGTC AGTGCGCCGC CCGCCGCTAC CAGGAAAACC ACCGTACTGG AGCTCTTCGG GCCCTCGCAG ATTCGCCGCC TGTTCGTGTC GATCGTCGTG CAGGTTGCGA TCAATATGGT GATCTACGGC TTCATCGTGT GGGTGCCGAC GTTCCTGATG AAACAGGGCA TCGGTATGGC GTCTTCACTG GGCTATACGG CGCTCATGTC GCTCGGCGGA CCCGCAGGCG CACTGCTAGG CGTACTCCTC GCCGACAGGA TCGGGCGCAA GAAGGGGCTC ATCGCGGTGT CCGCTCTCGC GGCGGTGGTC GGCTGGCTGT ACGGGCATTC GACCGGCATC CAAATGGCGA CGCTGCTCGG CTTCCTGCTG TTCACGCTCA CGTATCTGAT GGTGGCACTG GGCATTGCGA CCTACATCCC AGAGCTCTTT GCCACGGAGA ACCGCATGCG GGCAAGCGGC ATCGCCGGTT GCGCCGGGCG CATTACAGGC ATCTTCGCGC CGCAACTCGT TGTCATGATG TACGCCACGG GCGGTGTGAA AGACGTGCTG ACGATGATCA TCGGCGCGCT GGTCGTGCTG GCGGTCGTCC TTGCAGTGTT CGGGATCGAA ACGAATCGAC GCTCACTCGA GGACATTGCG CCTGCGATCG ACGCGAACGA TGCACTACCG GCGTCCTCGC TTTCACATCA ATCGCAACGT TGA
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Protein sequence | MPSTDSPTVS PVSAGARLDR LPISRFHKRV LWLIGGGMFL DSFDIYLAGG VLGALAKTGW STMNLNAAFL SSTFIGMLIG AFTAGVLGDA KGRKFTYQFN LAMFGLASIA GAFAANMTWL IVCRFFMGLG LGAEIVIGYG SIGEFMPPAV RGKWSAYLSL ITNSALFFST FLGYLVIPSI GWRAMFAVVG AGAMVVWVLR KKMPESPRWL ESKGRYAEAE AILRAAEEES ARNSTLPPVV SAPPAATRKT TVLELFGPSQ IRRLFVSIVV QVAINMVIYG FIVWVPTFLM KQGIGMASSL GYTALMSLGG PAGALLGVLL ADRIGRKKGL IAVSALAAVV GWLYGHSTGI QMATLLGFLL FTLTYLMVAL GIATYIPELF ATENRMRASG IAGCAGRITG IFAPQLVVMM YATGGVKDVL TMIIGALVVL AVVLAVFGIE TNRRSLEDIA PAIDANDALP ASSLSHQSQR
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