| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5163 |
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| Symbol | |
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| ID | 6278615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1329078 |
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| End bp | 1329878 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616250 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001888893 |
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| Protein GI | 187919862 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.752171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAT CGAGCAGCCC CGTCTGCGTG GTGACGGGAT CGGCTTCGGG CATCGGCGCG
GCGACCGCGC TGCGCTTCGC GCAGGCGGGC TGGTCGGTGG CCATAGGCAA CTTCGACGAC
AGCACGCGCC AAACAGCGCT GTCCGTCGAA GCGGCCTGCC GCGACGCCGG CGCGTCTACG
CTGATTTTCG ACGCGGATGT CGGCAACGAT GCGCACTGCC GCCGCGCGAT GGACACCGTG
GCGAGCCGCT GGCAACGTGT CGACGCGCTG ATCAATTGCG CGGGCACGAC CCGCGTGATT
GCGCACAACG CGTTCGACGA GATCGACGCT GTCGAGTTCG AGCGCGTGTA CCGCGTGAAC
CTGATCGGGC TGTATCAGAT GACCCGCGCA GCAGTGCCGT TGCTGCGCGA ATCGGCCGGT
CTATCGACGG TGAAACGCAG TACCAGCGTG GTCAACATTT CGTCGCTGGC GGGCCTGAAC
GGCACCGGGT CGTCGATCGC GTATGCGGCG TCGAAAGGCG CGGTGAATAC GCTGACGCTC
TCGCTTGCGC GCAGTCTCGC GCCGCATGTC CGCGTCAACG CGATCGCGCC CGGCATGGTC
GACGACGGCC TGTTGCTGCG CGTGCTCGAC CCGCAAGCCT ATGACGGCGT GCTAGCCAGA
ATGACCGAAC AGGCGCCGCT CAAACGGGTG TCGATGCCCG CCGAAATCGC GGACCTGGCC
TGGTTTCTCG CGACGCAGGC GCCCGCCATG ACCGGCCAGG TGATCGCCGC GGAAAACGGC
TTGCTGCTGA ACGGCGGTTG A
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| Protein sequence | MTQSSSPVCV VTGSASGIGA ATALRFAQAG WSVAIGNFDD STRQTALSVE AACRDAGAST
LIFDADVGND AHCRRAMDTV ASRWQRVDAL INCAGTTRVI AHNAFDEIDA VEFERVYRVN
LIGLYQMTRA AVPLLRESAG LSTVKRSTSV VNISSLAGLN GTGSSIAYAA SKGAVNTLTL
SLARSLAPHV RVNAIAPGMV DDGLLLRVLD PQAYDGVLAR MTEQAPLKRV SMPAEIADLA
WFLATQAPAM TGQVIAAENG LLLNGG
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