| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5153 |
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| Symbol | |
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| ID | 6278916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1318862 |
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| End bp | 1319548 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642616241 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001888884 |
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| Protein GI | 187919853 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAA TCAAGGCTCT CGTTTTTGAT CTTTACGGCA CGCTTTACGA CGTGCACTCC
GTTGCCGGCG CGTGCGGTGA GAGGTTCCCG GGGCGGGGCC TCGAGATCAG CATTCTCTGG
CGACAAAAGC AGCTCGAATA CACATGGTTG CGTACCCTCA TGGGCGACTA TGTGCCATTC
GAGAAAGCGA CGGACGATGC GCTTGACTTC GTCGCATCGC ACCTGAAACT TTCATTGACC
ACGGCGGCGC ACAAGGATCT GTGCGACGCT TATCTCCGGC TTCAACCCTA TCCCGGTGTT
GAAGCGACGC TTACGAGCCT GCGGGAAAGG GGGCTACCGC TTGCAATCCT GTCCAACGGA
TCGTCGTTCT CGATCGGCTC GGTCGTGAAG AATTCGGGCC TTGACCATCT TTTTGACCAC
CTGATCAGTG TCGAAAGCAC CAAAGTCTTC AAACCTCACG ACGCCGTCTA CAGGCTCGCG
GAAAATGCAC TCGGTTGGTC AAGGGACGAG ATCCTTTTCG TGTCGTCGAA TGGATGGGAT
GCCTGTGGAG CGCGACACTT CGGGTACCAG GTATGCTGGG TCAACCGTAA CGGGAATACG
CTCGATGTGC TGGGGCAAAA GCCAGACTTC GCCGTTACCG ATCTGCGGGA ATTGCCCGAC
CTCGTCGGCA ATGCCGTGAT GTCCTGA
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| Protein sequence | MKPIKALVFD LYGTLYDVHS VAGACGERFP GRGLEISILW RQKQLEYTWL RTLMGDYVPF
EKATDDALDF VASHLKLSLT TAAHKDLCDA YLRLQPYPGV EATLTSLRER GLPLAILSNG
SSFSIGSVVK NSGLDHLFDH LISVESTKVF KPHDAVYRLA ENALGWSRDE ILFVSSNGWD
ACGARHFGYQ VCWVNRNGNT LDVLGQKPDF AVTDLRELPD LVGNAVMS
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