| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5145 |
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| Symbol | |
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| ID | 6280379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1309867 |
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| End bp | 1310751 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642616233 |
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| Product | Patatin |
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| Protein accession | YP_001888876 |
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| Protein GI | 187919845 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.270207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTT ATCCGAATTT GTCCGCTCCA CCCGGCTTGA CCGCCTTTGT GTTCGCAGGC
GGCGGCAGCC TCGGCGCGAT CGAAGTTGGC ATGCTGCGCG AGTTGCTCGA TCATGGTGTG
CATCCGGGTT GCGTGATCGG CGCATCCGCC GGTGCGATCA ATGCGGCGTA TTTTGCTGGC
CGGCCCGACG GCGATTGCGT AGCTATGCTC GAATTACTGT GGTGTCGGAT CAGGAGGCGG
GACATCATGC CGCTCACCAT GTTCGGGTTG CTCGAGATGG TTCTGAGTCG GCGCTCCCAC
CTTGTCGAAG CCACAGCGCT GCGCATGCTG CTGGAAAAGA ATTTGTCGTA TTCCCGGGTG
GAGCATGCGG CCATACCACT TCACATTGTC GCGACGGACA TGCAAAGCGG CAAAGAAATT
ATCCTTTCGT CTGGCCCGCT GGTGGATGCC GTCCTCGCGA GCGCTGCGAT TCCCGGTGTG
TTCCCGCCGG TGCGCATTGA TGGGGTGGAT CTGGTCGACG GCGGCGTGGC GAACAATACG
CCGATCTCCG TGGCCGTCTC ACTTGGTGCG ACACGCGTCA TTGTGCTTCC GGCCGGGTTT
GCCTGCGCAA TGCGCAAGCC GCCCGGTAAT GCAATCGCGC AGGCCATGCA CGCGCTGACA
CTTCTCATTG CGCGTCAGCT TGTGCGCGAT CTGGAATCCT ATTCATCCCG CGCAGAGATC
TTTGTAGTGC CGCCATTGTG TCCGCTCGAT GTGTCGCCTT ACGACTACAC GCAGTGCGAC
CGCCTGATTG AGCGTGCGGC TGCGAAGACG CGTGCATGGT TGAACGAAGG CGGTCTTGAG
CGCGGAGTAA TCCCGGGTGA GCTACGCGAA CACAAGCATG CGTGA
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| Protein sequence | MSTYPNLSAP PGLTAFVFAG GGSLGAIEVG MLRELLDHGV HPGCVIGASA GAINAAYFAG
RPDGDCVAML ELLWCRIRRR DIMPLTMFGL LEMVLSRRSH LVEATALRML LEKNLSYSRV
EHAAIPLHIV ATDMQSGKEI ILSSGPLVDA VLASAAIPGV FPPVRIDGVD LVDGGVANNT
PISVAVSLGA TRVIVLPAGF ACAMRKPPGN AIAQAMHALT LLIARQLVRD LESYSSRAEI
FVVPPLCPLD VSPYDYTQCD RLIERAAAKT RAWLNEGGLE RGVIPGELRE HKHA
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