| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5139 |
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| Symbol | |
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| ID | 6278144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1303735 |
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| End bp | 1305837 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616227 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_001888870 |
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| Protein GI | 187919839 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.228449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGAT TCACTCGTGT TGGCGCCTTC TTCGTCCTCG TCGCAACGCT TCTTCTTGCT
CCATCGTTCG AGGCTCGTGC GGCGTCCTCG AACTGGGCCG GCGATCAGCG CGCCAGTGTG
CGCATCATCA CGGCAACCGA CGGCGTAGCC GGGAACACGC TGCAGATAGG CGTCGAATTT
CGCTATCCGA ACGGCTGGCA TGGTTACTGG CGCACCCCTG GCGATGCCGG CATCGCGCCG
ATTTTCGACT GGTCCCGGTC CCGGAATGTC GCATCGGCAT CCGTGTCCTG GCCGGCGCCG
TCCCGCCTCG TTATCTCGGG TCTGCAAAAC AGTGTCTATA CGGGCGATCT GATTCTGCCG
GTGAGCCTTA AGCTGGACCA TCCGCACGAG GCGACCCGCA TTGCGCTGAC GCTCGACTAT
GCGAGTTGCG CGAATGTTTG CGTGCCCGAA CATGCGGAGG TGGCGCTCAC CTTGCCGCCG
GGCATGGACG GACCATCAAG CGAAGCCGCA GCTATCGCCG CAGCGGCGCA AAGGGTGCCG
CAGACGCCCG CAGAGGCCGG AATCGGCGTG GTGCATAGCA CGCTGGAGCA AACCTCCGCC
GGCCGGCGCC TGAAGGTCGA TCTGCGCAGC GAGGGCACCC CGTTTCTGTC GCCCGACCTG
TTCGTCGAAG GAGCCGAGGC CGGTCTGCCC GCAGCGCCAC ACGTACACCT CTCAAACCAC
GGCCACCGGG CTGCACTGGA AGTCGAATTG CCGCCTGCCG CTGCAGCGAA AGAGCCGCTG
CGCCTGACGG TGGTGGACGG ATCCAGAGCG GCCGAATTCA TGACCGCATC AGTCGTCCCC
ACGGGAGACG ACGGTCACGG CATCGTCGTC ATTCTGGGCT TGGCGCTGCT TGGCGGCCTG
ATTCTGAACT TCATGCCATG CGTGTTGCCC GTTCTTTCAA TCAAGGTTTT CTCGGTAGTG
AAAGCCGCAA GCACCGGACG CAAAACGGCA AGGCGGGTGG CGCTCGCAAC GGCCCTGGGA
ATCGTCACTT CGTTCGGATT GCTTGCCGCC GTGCTGTCCA TCCTCAAACT CGCGGGTGCG
TCGCTTGGAT GGGGCATACA GTTCCAGCAA CCGTGGTTCC TCGCAGGCAT GGCCGTCGTC
ACGACGCTGT TTGCGGCAAG CTTCTTTGAC TGGCTCCCGA TCGGTCTTCC GCCATTCCTT
TCCGGAGGTG CGAGCGGTGC AACCAATCGG GGGCCGCTTG TCGAGGCGTT CCTCGGCGGC
ATGCTTTCTA CGCTTCTTGC CACACCGTGC TCGGCTCCGC TCGTCGGCAC CGTGGTCGGC
TTTGCATTGG CACGTAGGCC GCTCGAGATT ACGGCGGTGC TTCTCGCGCT CGGGGTAGGA
ATGGCACTTC CCTTCCTGAC ATTGGTACTG GCGCCGTCGC TCGCGACGCG GCTTCCGCGC
CCCGGCCAGT GGATGATCCA GTTGCGCAAG ATCATGGGCC TGCTGCTGCT CACGACCTCT
ATCTGGCTGA TTGCGTCGTT GTGGAATATT GCGGGGATGG CCGTCGCGTC ACTCGTCAGT
ATCGTGCTGA TTGCCATGCT TGCCGTGCGG GCCGCCGAGA CCCGATGGGG AAGCCTGCGG
ACCGCGCGAT GGTCAGGCGC AGCGACTGCG CTCCTCGCGT GCTGCGCCAT TGCAATTTCC
TCGCTCCCCC CTTTCGGCAC AGGAGACCGA AGCGCTCCGC CGACCGAATG GCAAGCGTTC
GATCCGAATG CAATCAGCGC GCTGGTCGCG AGCGGCAAGA CTGTGCTTGT CGACGTAACG
GCAAGCTGGT GTCTCACCTG CAAGGTCAAT GAGCTATCCG TTCTGGACAC GGCTGCCGTG
CGCACCCGGC TCAGACAGGA CAATATCGTG CGCATGCGAG CCGACTGGAG CCGGTATAAC
CCCGGAGTGC TCGCCTACAT CCAGCGTTTC GGTCGTTTCG GCATTCCGCT CGACGTGGTA
TATGGGCCTC GCATGCCACA AGGGCAATTG CTGCCTGAGA TCTTGCAAAC TTCGACGCTC
TTCCATGCGC TCGACAACGC CACGCCCGCC AGAACAGCGA AAAGCAATTC ATCCGCCGGA
TGA
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| Protein sequence | MPRFTRVGAF FVLVATLLLA PSFEARAASS NWAGDQRASV RIITATDGVA GNTLQIGVEF
RYPNGWHGYW RTPGDAGIAP IFDWSRSRNV ASASVSWPAP SRLVISGLQN SVYTGDLILP
VSLKLDHPHE ATRIALTLDY ASCANVCVPE HAEVALTLPP GMDGPSSEAA AIAAAAQRVP
QTPAEAGIGV VHSTLEQTSA GRRLKVDLRS EGTPFLSPDL FVEGAEAGLP AAPHVHLSNH
GHRAALEVEL PPAAAAKEPL RLTVVDGSRA AEFMTASVVP TGDDGHGIVV ILGLALLGGL
ILNFMPCVLP VLSIKVFSVV KAASTGRKTA RRVALATALG IVTSFGLLAA VLSILKLAGA
SLGWGIQFQQ PWFLAGMAVV TTLFAASFFD WLPIGLPPFL SGGASGATNR GPLVEAFLGG
MLSTLLATPC SAPLVGTVVG FALARRPLEI TAVLLALGVG MALPFLTLVL APSLATRLPR
PGQWMIQLRK IMGLLLLTTS IWLIASLWNI AGMAVASLVS IVLIAMLAVR AAETRWGSLR
TARWSGAATA LLACCAIAIS SLPPFGTGDR SAPPTEWQAF DPNAISALVA SGKTVLVDVT
ASWCLTCKVN ELSVLDTAAV RTRLRQDNIV RMRADWSRYN PGVLAYIQRF GRFGIPLDVV
YGPRMPQGQL LPEILQTSTL FHALDNATPA RTAKSNSSAG
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