Gene Bphyt_5123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5123 
Symbol 
ID6280021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1291383 
End bp1292471 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content61% 
IMG OID642616211 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001888854 
Protein GI187919823 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCC TTTACGACCC GCTCACCATG GGCAAGCTTC AACTCAAGAA CCGCGTCTTC 
ATGGCGCCAC TGACCCGCAA CCGTGCCCGG CCAGACGGAG TGCCGGGAAG CATGGCGGCC
GTCTACTATA GCCAGCGTGC GTCGGCAGGA TTGATCGTGA CGGAGGCCAC CCAGATCTCG
CCCATGGGCA AGGGCTATGT GAACACGCCT GGCATACACA CCGACGAACA GGTCGCGGAG
TGGAAGAAGA TCGTCGCGGC CGTACACCAG GCTGGCGGGC GAATCTTTCT TCAGCTCTGG
CATGTGGGTC GCATCTCTCA CAGCAGCCTG TTGCCAGGCA ATGTCGCGCC ATTGGCCCCA
TCGGCCATCA GGGCCAAGAG CCAGACAGTC ACCGCATCGG GTTTCGTCGA CGTATCCACG
CCTCGTGCGA TGACAGCCAC CGACATCCTC CAGACCATCG GAGATTTCCG CAAGGCGGCG
GCCAATGCCC ATCTGGCAGG CTTCGATGGG GTAGAGATTC ATGCCGCCAA TGGCTACCTG
ATCGATCAGT TCCTCCAGTC CAAATCGAAT GCTCGTACGG ACGATTACGG CGGTACGACT
GCGAAACGCG TCCGCTTCCT CCGCGAGGTC GTCGAGGCGG TGCTCGATGT ATGGGAGCCG
ACGCGGGTAG GTGTCCGCAT CTCGCCAGGC GGCACCTTTA ACGATATGGA CGATGAGGAT
CCCGAACAAA CATTCTCCCA GGTCGTCGAT ATGCTCAACG GTTTTCGTCT GGGCTATCTC
CACGTCGTGG AAGCCGCGCC AGAGGAGACG CCTGCGCGCG AGCAGTTGAC CACCCTGTTC
AAGTATCTAC GGGGTGCATG GAAGGGAATT TACATCGTCA ACGGTGGCTA CGATGCCGCA
CGGGGTGAGC TCGCCGTCTC CAGCGGTGAT GCCGACGCTG TGGCTTACGG CCGACTGTTC
CTCGCGAATC CGGATCTGCC AAAACGCCTG AGCCATCGGG GGCCGCTCAA TGCCCCCGAT
CCCAAGACCT TCTACGGTGG CACCGCAGCC GGTTATATAG ATTATCCAGA TTGGTCTGCG
CATGTCTGA
 
Protein sequence
MSSLYDPLTM GKLQLKNRVF MAPLTRNRAR PDGVPGSMAA VYYSQRASAG LIVTEATQIS 
PMGKGYVNTP GIHTDEQVAE WKKIVAAVHQ AGGRIFLQLW HVGRISHSSL LPGNVAPLAP
SAIRAKSQTV TASGFVDVST PRAMTATDIL QTIGDFRKAA ANAHLAGFDG VEIHAANGYL
IDQFLQSKSN ARTDDYGGTT AKRVRFLREV VEAVLDVWEP TRVGVRISPG GTFNDMDDED
PEQTFSQVVD MLNGFRLGYL HVVEAAPEET PAREQLTTLF KYLRGAWKGI YIVNGGYDAA
RGELAVSSGD ADAVAYGRLF LANPDLPKRL SHRGPLNAPD PKTFYGGTAA GYIDYPDWSA
HV