| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5117 |
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| Symbol | |
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| ID | 6279585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1284196 |
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| End bp | 1285320 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642616206 |
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| Product | alanine dehydrogenase |
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| Protein accession | YP_001888849 |
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| Protein GI | 187919818 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.564204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATTG GAGTTCCGAA AGAAATAAAA AACCACGAAT ATCGGGTTGG ACTTACGCCT
TCTTCGGTGC GCGAATTGAC TGGACGCGGT CATCGAGTCG TAGTCGAGCA GGGGGCTGGA
GCAGCTATTG GGCTCAACGA CGACCTCTAC GAATGGGCTG GAGCGACTAT CGCGAATGGC
CCGGTGGAAG TATTCGAACG CGCCGATATG GTGGTGAAGG TGAAGGAGCC GCAGAGAACT
GAATGGGAGA TGCTCCGCAG CGGGCAGATT CTCTACACCT ACTTGCATCT TGCTCCGGAT
CCTGAACAGA CGGCAGCGCT CGTGAAGTCG AGGGCCATCT GCATTGCTTA CGAGACCATC
ACTGGACCGA ATGGCGGCCT TCCGCTGCTG GCACCGATGA GCGAGGTGGC TGGCCGAATG
AGCATTCAGG CTGGTGCGTC GCACCTCGAA ATAAGTAAGG GTGGACGAGG CGTATTGCTT
GGTGGCGTTC CGGGCGTTTC GCCCGCACAC GTCGTGATCA TCGGCGCGGG TGTGGTCGGC
ACGAACGCGC TGCAGATGGC TATTGGTCTG GGTGCACGCG TGACGGTGCT GGACACAAGC
ATTGACCGGC TTCGATCGCT GGACCTCGTG TTCGGCAACC GGATTACGAC CGCGTATTCG
ACGTCGTCCA GTATCGAAGA CGCGGTCGTC GACGCAGATC TGCTCATTGG AGGGGTCCTC
GTGCCCGGTG CGGCCGCACC CAAACTCGTG ACCCGCGCAA TGATCGCGAA GATGAGGAGA
GGGGCGGTCG CAGTGGATGT TGCCATCGAC CAGGGCGGTT GTTTCGAGAC GTCAAAAGGA
ACGACGCACG GCGCGCCGAC GTATGAAATC GATGGCGTCA TCCACTACTG CGTCACCAAT
ATGCCAGGCG CTGTCGCCCG CACCTCGACG TTCGCGCTCA ACGGTGCGAC GCTTGGACAC
GCATTAGCCA TCGCAGATCG CGGTTGGCGC GAGGCACTGC GCGCCGACAG GCATCTGCGA
AACGGTCTTA ACGTATGTGA CGGCCAGGTC ACCCATGAAG CAGTCGCTTC GGCACTTGGA
TACGAATACG TGAACCCGAG GATCCTCCTC GAACAGTCGG CGTAA
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| Protein sequence | MLIGVPKEIK NHEYRVGLTP SSVRELTGRG HRVVVEQGAG AAIGLNDDLY EWAGATIANG
PVEVFERADM VVKVKEPQRT EWEMLRSGQI LYTYLHLAPD PEQTAALVKS RAICIAYETI
TGPNGGLPLL APMSEVAGRM SIQAGASHLE ISKGGRGVLL GGVPGVSPAH VVIIGAGVVG
TNALQMAIGL GARVTVLDTS IDRLRSLDLV FGNRITTAYS TSSSIEDAVV DADLLIGGVL
VPGAAAPKLV TRAMIAKMRR GAVAVDVAID QGGCFETSKG TTHGAPTYEI DGVIHYCVTN
MPGAVARTST FALNGATLGH ALAIADRGWR EALRADRHLR NGLNVCDGQV THEAVASALG
YEYVNPRILL EQSA
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