| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5107 |
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| Symbol | |
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| ID | 6278220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1274823 |
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| End bp | 1275725 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616197 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001888840 |
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| Protein GI | 187919809 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATTC GTTTCGATGG CAAGGTCGCG ATCGTGACCG GCGCGGGCGC GGGTCTTGGC
CGAGCACATG CGCTGGCGTT CGCGGCGCGT GGCGCGAAGG TGGTCGTCAA TGATTTCGGC
GGCGCGCGCG ATGGCACGGG CGGTTCGTCC GAGGCAGCGC TCGCGGTGGT CGAAGAGATC
CGCCAGGCAG GCGGCACGGC GATCGCCGAC GGCGCGAACG TGGCGGACTA CGAGCAGGTG
CAGGCAATGG TCAAGCGCGC GGTGAGCGAG TTCGGCCGCG TCGACATTCT CGTCAATAAC
GCGGGCATCC TGCGCGACAA GAGCTTTACG AAGCTCGAAA TGACCGACAT CAAGGCGGTT
CTCGACGTTC ATCTGATGGG TGCGATCAAC TGCTCGAAGG CGGTATGGGA CGTCATGCGC
GAGCAGAACT ACGGCCGCAT CGTCATGACC ACTTCGTCGT CCGGCATGTA CGGCAACTTC
GGGCAATCGA ACTACGGCGC GGCGAAGATG GCGGTGATTG GCCTGATGAA TGCGCTTACG
ACCGAAGGCC GGAAGAACAA CATCCTGGTC AACACGATCG CACCGGTTGC GGCGACGCGC
ATGACCGCGG ACATCCTGCC GGAAGCAATG CTCGAGCGTA TCCAGCCGGA GCGCGTGACG
CCCGCCGTGT TGTTCCTCGC GAGCGAGAAC GCGCCGTCGA AAACCATCAT CGCAGCGGGC
GGCGGCGCAT TCGCCGCGGC GACCATCGTC GAATGCGCGC CGGTGCTGCT GTCCGATGAC
GACGTCACGC CGGAAGGCGT CGCCGCTCGC TTCGGCGATA TCGCTGACTG GAGCACTGCG
CGTGCATACG GCGAGTCGGG CGAACAGGTG CAGCGTTTCC TGAAGCTCGT CTGCGACATG
TAA
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| Protein sequence | MSIRFDGKVA IVTGAGAGLG RAHALAFAAR GAKVVVNDFG GARDGTGGSS EAALAVVEEI
RQAGGTAIAD GANVADYEQV QAMVKRAVSE FGRVDILVNN AGILRDKSFT KLEMTDIKAV
LDVHLMGAIN CSKAVWDVMR EQNYGRIVMT TSSSGMYGNF GQSNYGAAKM AVIGLMNALT
TEGRKNNILV NTIAPVAATR MTADILPEAM LERIQPERVT PAVLFLASEN APSKTIIAAG
GGAFAAATIV ECAPVLLSDD DVTPEGVAAR FGDIADWSTA RAYGESGEQV QRFLKLVCDM
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