| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5102 |
|---|
| Symbol | |
|---|
| ID | 6278679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1269277 |
|---|
| End bp | 1270419 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642616192 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_001888835 |
|---|
| Protein GI | 187919804 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTATC AACTGCCCAC TGAAGAGCAG AACCTCGCCG TCGAGAGCTT TCGGAAGTTT
CTGCAAGCGG AAGTCAAACC CGTTGCCAGG GAGTATCGCG ACCGCTTCAT TCCGAAAGAG
AAGATGCGCG AGCTCACGGA GCGCATCGCC GATTTCGGTC TGCCTGGCTG CACCATCCCT
GCTGAATACG GCGGCATGGG CTGGTCGTTC ACCACGCAGG GCATGCTTTT CGAGGAACTC
GTGGCCTGCT CATGCGATAT CGCGCTGTGC GTCATGCTCA ACATGGGCCT CGCGGCCATG
CTGACCAACG CCCGGCCCGA AGTGCGCGAG CGCTATATGC CCGGTGTGCT GGCCGGCAAG
ATCTTCGGCT CGATCGGCAT CAGCGAGCCG GACGTGGGCT CGAATGTGGC AGAACTGAGA
ACGCGCGCCG TGCGCGACGG CGACCACTTC ATCGTCAATG GCGAAAAGAC CTGGATCACC
AACGGCGTTT ATTCCGACGT GCTGATCTGC ACCGTGCGCG GCGAAAAAGG TCTCTCGCAC
ATTCTTATCG ACCGCAAGGA GCATGGCTAC GAGTCGCGCA ACATCGACAA GATCGCGCTC
GGGTCGCAAT CCACCGCACA GATCTTCATC ACCGATGCTC GCGTGCCGGC CACCAACGTG
ATTGGCGAGG AAGGAGAAGG GCTGCGCAAT ACGATGAAGG TCTTCGAGCA CGCGCGCGCG
CACGTGGGCA CGCTGTCGGT CGGGATCATG CGCGCCGCGC TGGAGGAGTC TATCGCATAC
GCGAAGGAGC GCAAGCAGTT CGGCAAGGTG ATCGCGGCGC ATCAGCTGAT CGCGGCGAAG
CTCGCCAACA TGGCGATCAT GGTCGACGCG TCGCGCCTGA TGTGTCAGCG CGTGTTCGGC
CTGATCGACG CGGGCGTTCG TTGCGACATG CAGGCTTCGA TGGCCAAGGC GTTCGCCACT
GAAGCTGCTG TCAAGGTGTG CCGGGACGCC GTGCAACTGC ACGGCGGCAA CGGGATCACG
AAGGAGTTCA ACGTCGAGCG TCTGTTGCGC GAAGCGATCA TCATCCCGAT CCCGGATGGC
ACGACGGAGA TCCAGCAGCT CATCATTTCG CGCGCGCTGA CCGGAGTGGC GGCGTTCGTT
TGA
|
|---|
| Protein sequence | MPYQLPTEEQ NLAVESFRKF LQAEVKPVAR EYRDRFIPKE KMRELTERIA DFGLPGCTIP
AEYGGMGWSF TTQGMLFEEL VACSCDIALC VMLNMGLAAM LTNARPEVRE RYMPGVLAGK
IFGSIGISEP DVGSNVAELR TRAVRDGDHF IVNGEKTWIT NGVYSDVLIC TVRGEKGLSH
ILIDRKEHGY ESRNIDKIAL GSQSTAQIFI TDARVPATNV IGEEGEGLRN TMKVFEHARA
HVGTLSVGIM RAALEESIAY AKERKQFGKV IAAHQLIAAK LANMAIMVDA SRLMCQRVFG
LIDAGVRCDM QASMAKAFAT EAAVKVCRDA VQLHGGNGIT KEFNVERLLR EAIIIPIPDG
TTEIQQLIIS RALTGVAAFV
|
|---|
| |