Gene Bphyt_5101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5101 
Symbol 
ID6279034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1268009 
End bp1269250 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content64% 
IMG OID642616191 
ProductThiolase 
Protein accessionYP_001888834 
Protein GI187919803 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TCTACATCGT CGGCATGGGC ATGACCCCGT TCGGTCGTCA TCTCGACAAA 
TCGGTCAAGC AGCTCACGGC CTGGGCGGTC GAAGACGCCT TGAAGGACTC GGGCTGTGAG
CGCGGCTGGG TCGAAGCGGC CTATTTCGGC AACACCACGC AGGGCCACAT GCAGGGCCAG
CACATGATCC GTGGCCAGGT GTCGCTGATC CCGCTCGGCT TCGGCGGTAT TCCGATCCAC
AACATCGAAA GCGCCTGCGC GTCGGCAAGC AGCGCATTTC ACCTCGCCGT GACGCAGCTG
CGCGCGGGCA TGGCGGATGT CGTGCTGGCC GTGGGCGCGG AGAAGATGTA CTCGAGCGAC
AAGGCGCGCA TGTTATCCGT GTTCGACTCC GCATGGGACA TCGAAACAGC CGAAGCCAAC
GGGGCGCAGA TGGTCGAGCT GGGCAAAGGC GTCACGGTGC CGGAGGGCAC GCAGTCCGAC
AAGCCTTACA GCGTATTCAT GGATGTCTAT GCCGGCATCG GCCGCCAGCT GATGTCGCGC
TACGGCATCA CGCAGCGGCA GTTCGCCGCT GTGTCGTCGA AGAATCACGG TCATTCGGTG
CACAACGAGC GCTCGCAATA TCGCAAGCCG ATGTCGATCG AGGAGATTCT CGCGGCGCCG
CCGATCACGT TTCCGCTCAC ATTGCCGATG TGCTCGCCGA TCTCCGATGG CGCCGCCGCC
GCGATCCTGT GCACGGAGTC CGCGATGAAG CGATATGGCT TCGACCGCAA TCGTGCGGTA
CGCGTGCTTG CGACAATCGT GCGCTCGGCG TCGGCGCGCG CAGGCGAGGA TCTCGCCAAC
CACATCACGG TTCATGCAGC GAAGCTCGCC TATGAAGAAG CGGGTATCGG GCCCGACGAC
ATCAACGTAG CCGAGCTGCA CGACGCGTCG TCGATCGGCG AAATCGCGCT GTGCGAGAAC
CTTGGCCTGT GCAAGCCGGG CGAGAGCGGC GTGATGGCCG AGCGCGGCGA GAGCACGATT
GGCGGGCGTC TGCCGATCAA CCCGTCAGGC GGCCTCGAAT CGAAGGGACA TCCGATCGGC
GCGACGGGCC TCGGACAGAT CTTCGAACTG GTCGGGCAAC TGCGAGGCGA ATGCGGTCCG
CGCCAGGTCG AAGGCGCGCG CTTGGCGATC CAGGGCAACG GCGGCGGCCT GTGGGGTGTG
GAAGAGAGTA TCGACCACAT CGGCATCTTC GGTCGCGCCT AA
 
Protein sequence
MENIYIVGMG MTPFGRHLDK SVKQLTAWAV EDALKDSGCE RGWVEAAYFG NTTQGHMQGQ 
HMIRGQVSLI PLGFGGIPIH NIESACASAS SAFHLAVTQL RAGMADVVLA VGAEKMYSSD
KARMLSVFDS AWDIETAEAN GAQMVELGKG VTVPEGTQSD KPYSVFMDVY AGIGRQLMSR
YGITQRQFAA VSSKNHGHSV HNERSQYRKP MSIEEILAAP PITFPLTLPM CSPISDGAAA
AILCTESAMK RYGFDRNRAV RVLATIVRSA SARAGEDLAN HITVHAAKLA YEEAGIGPDD
INVAELHDAS SIGEIALCEN LGLCKPGESG VMAERGESTI GGRLPINPSG GLESKGHPIG
ATGLGQIFEL VGQLRGECGP RQVEGARLAI QGNGGGLWGV EESIDHIGIF GRA