Gene Bphyt_5100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5100 
Symbol 
ID6278573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1267211 
End bp1267981 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID642616190 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001888833 
Protein GI187919802 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATT CGCATGCAGT GGTGGACTCG GTCGGCTGGT TGACGTTGGA CCGTCCCGCC 
GCCATGAACA GTTTGAATCG TGAGATGGCG ACGGGCCTGA TCGCGCAGTT GAAAGCGTGG
CGCAACGACG ACGCCGTACG GGTCCTCGTC GTAACCGGCA ACGGCCGCGC TTTCTGCGCG
GGTGCCGACC TGATCGAGGC CGCCGAGGCC ACGCAGCCGG GCAGGCGGGA ATTCCTGGAA
CTGATCGTCG AGTTTTTCGA CACGCTGCGC GCGTTCCCGA AGCCGGTGAT CGCCGCGGTC
AACGGTCTTG CGCTGGCGGG CGGTCTCGAA GTGGTGCTCG CGTGCGACGT GGTGCTCGCC
GCCGAGTCGG CGCGTCTTGG CGACGCACAC TCGAATTTCG GCGTTTTCCC TGGCGCCGGC
GGCGCGGCGA TTCTGCCACG CAAGGTGCCG GCGAACGTTG CGCGCTACCT GCTTTTCACA
GGCGATGCGA TGAGTGCCGC CGAGCTCAAG GGCTACGGCC TCGTCAACGA GGTGCTGGCC
GACGCGGAAC TCAGGCCTCG CGCCCAGGCG CTCGCCCACA AGTTCGCGAA GAAGAGTCCG
CTCGTGCTGG CGCGTATGAA GCGCGTGGCC AACGAGACCG CCGACAAATC GGCAGCGGAT
GCACTGCGCC ACGAATTGCT GGAGCTGCGC AACCATCAGC GCTCATACGA CGTTCAGGAA
GGCTTGCGCG CGTTTGCAGA AAAGCGCGAG CCGCAGTTCA AGGGCTGCTG A
 
Protein sequence
MSYSHAVVDS VGWLTLDRPA AMNSLNREMA TGLIAQLKAW RNDDAVRVLV VTGNGRAFCA 
GADLIEAAEA TQPGRREFLE LIVEFFDTLR AFPKPVIAAV NGLALAGGLE VVLACDVVLA
AESARLGDAH SNFGVFPGAG GAAILPRKVP ANVARYLLFT GDAMSAAELK GYGLVNEVLA
DAELRPRAQA LAHKFAKKSP LVLARMKRVA NETADKSAAD ALRHELLELR NHQRSYDVQE
GLRAFAEKRE PQFKGC