Gene Bphyt_5096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5096 
Symbol 
ID6278539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1259321 
End bp1260448 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content67% 
IMG OID642616186 
Productprotein of unknown function DUF323 
Protein accessionYP_001888829 
Protein GI187919798 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.397537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAG CGAACAAGCA TGGGTACGGG GCGGCCGCCG TCGCGATCGC TTTTGTCATC 
GCCGGCACCG CCGTCGCCGC GTATGAGCAC GTCAAGGGCC CCGCGCCGCT TGCCGTCGGC
GACGGCGTGG CCGGACCGAA AGACATGGTG TGGATCGCGG GCGGCAATTT CATGATGGGC
AGCGAGCACC CACGCGCGCT GCCCAACGAG CGGCCCGCGC ACGAGGTGAA GGTCCATGGC
TACTGGATCG ACCGCTACGA TGTCACCAAC ATGCAATTCG CCCGGTTCGT CGCCGCGACC
GGCTATGTCA CGACAGCCGA ACGCAAGCCG CGCTGGGAAG ATCTGGCGGT TCAGTTGCCG
CCTGGCACAC CGCGCCCCGC GGACGATACG CTCGTCCCCG GCGGCCTCGT CTTCACCGGC
AGCGACGCGC CCATCGCGCT GAACGACTAC TCGCGCTGGT GGAAATTTGT GCCCGGTGCC
AATTGGCGGC ATCCGGGCGG ACCGGGCAGC AGCATCGCCG GCATGGACCA TCATCCCGTC
GTGCAGGTCT CTTACGAGGA TGCGCTCGCT TATGCGCGCT GGGCACACAA GCGGCTGCCG
ACCGAAGCCG AATGGGAGTA CGCGGCACGC GGCGGCCTTG AGCAGGCCGA TTATGCGTGG
GGCAACGAGT TCGCGCCGGC CGGCAAAAAG ATGGCGAACA CCTGGGACGA TGCGGCCCGC
CCGTTCCCCG TCACCGCAGA CCGTGGCAGC CACGAGAAGG TTCAAGTGGG GACGAGCGTG
GTGGGCAGCT TCGCGCCGAA CGGCTATGGT CTCTACGACA TGGCCGGCAA CGTCTGGCAG
TGGGTCGCCG ACTGGTATCG CGCGGACGCG TTTCGCGTCG AGGCGGCGTC CGGGCATGTG
GTTAGCGATC CTCACGGCCC GGTCTCGAGC TACGATCCCG GCAACGGTCC GACCGCCGCG
GCCCCGGAAC GCGTGACGCG CGGCGGTTCG TTCCTGTGCA GTGAAACTTA CTGCATCAGC
TACCGAACCA GCGCGCGCCG CGGCACGGAC CCGATGAATG GCATGTCGCA TCTTGGCTTC
CGGCTGGCCA TGGACGAAGA CGAGTGGAAG CGGGAGTCGC GCCATTGA
 
Protein sequence
MKLANKHGYG AAAVAIAFVI AGTAVAAYEH VKGPAPLAVG DGVAGPKDMV WIAGGNFMMG 
SEHPRALPNE RPAHEVKVHG YWIDRYDVTN MQFARFVAAT GYVTTAERKP RWEDLAVQLP
PGTPRPADDT LVPGGLVFTG SDAPIALNDY SRWWKFVPGA NWRHPGGPGS SIAGMDHHPV
VQVSYEDALA YARWAHKRLP TEAEWEYAAR GGLEQADYAW GNEFAPAGKK MANTWDDAAR
PFPVTADRGS HEKVQVGTSV VGSFAPNGYG LYDMAGNVWQ WVADWYRADA FRVEAASGHV
VSDPHGPVSS YDPGNGPTAA APERVTRGGS FLCSETYCIS YRTSARRGTD PMNGMSHLGF
RLAMDEDEWK RESRH