Gene Bphyt_5092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5092 
Symbol 
ID6278117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1254139 
End bp1255122 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content63% 
IMG OID642616182 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001888825 
Protein GI187919794 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.2571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.304684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTCG GCAAAATCCC CGTGACGGTC ATTACCGGCT TTCTCGGCGC GGGCAAGACC 
ACACTCGTCA ATCACATTCT CGATGCAACC CGGCCGATGG CGATTGGCAT CATTGTCAAT
GAATTCGGCG AGGTGGGCAT CGACGGCCAG TTGATCGTGG CCGACGAGGA AGCCGTGGTC
GAGATCAACA ACGGCTGCGT GTGCTGCACC GTGCGTACCG ATCTGGTGGC CAGCGTGCGC
GAGTTACTGA CACGCTACGG CGACCGGCTG GAGCGGTTAA TCGTGGAAAC CTCCGGACTC
GCCGACCCCG CACCGGTACT GCAAACATTT CTCGCCGACC CCGACGTACG CGAGCGCGTG
GAACTCGAAG CCGTCGTCGC CGTGGTCGAT GCCTGTCATG CGCACGCGCA GCTTGGCGAC
GACATCGCAC GAGAGCAGAT CGTCTTCGCC GACCGCATCG TCATCAACAA GACGGATGCC
GCCACACCCG CTCAACGCAC AGCGCTAGCT GACACCATTG CGACGCTGAA TCCGACCGCG
CGGCTCGAGT TCACGTCCCA CAGTGCGATC GACGTGAACG CGCTGCTCGG CGTGCGTAGC
TTCTCGCTCG ACAACCTGCT CTCGATCGAA CCCGATCTGC TGGACGACGG CGCACACGAT
CACGAACACG ACAACTCGAT TGCATCTTGC GCGTTCGTCG TGCCGGGCGA CGTGGACGCC
GCGCGCTTCA ACCGCTGGGC CAATCAGCTC GTGCAAACGC ATGGACAGCA CCTGCTGCGC
ATGAAGGGCG TGCTCAACAT GCGTGGCGAG GCGCGGCGGC TCTATTTTCA CAGCGTGCAT
ATGTTGATGG ACACGCGCTT CGGCAAAGCC TGGGCACGCG ACGAAACGCG CGAAAGCCGC
TTCGTCGTGA TCGGCCGGGG CATCGATGCC GCCGTCATGC GCGACGGCCT GCTCGCTTGC
ATCGACGAAC CCGTGCACAG CTGA
 
Protein sequence
MRLGKIPVTV ITGFLGAGKT TLVNHILDAT RPMAIGIIVN EFGEVGIDGQ LIVADEEAVV 
EINNGCVCCT VRTDLVASVR ELLTRYGDRL ERLIVETSGL ADPAPVLQTF LADPDVRERV
ELEAVVAVVD ACHAHAQLGD DIAREQIVFA DRIVINKTDA ATPAQRTALA DTIATLNPTA
RLEFTSHSAI DVNALLGVRS FSLDNLLSIE PDLLDDGAHD HEHDNSIASC AFVVPGDVDA
ARFNRWANQL VQTHGQHLLR MKGVLNMRGE ARRLYFHSVH MLMDTRFGKA WARDETRESR
FVVIGRGIDA AVMRDGLLAC IDEPVHS