| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5085 |
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| Symbol | |
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| ID | 6280144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1249567 |
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| End bp | 1250643 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616175 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001888818 |
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| Protein GI | 187919787 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.145128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0831016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA TCAAAGTCGG CATGGTGGTC TTTCCCGGCT TCCAGCTGCT CGACATTGCC
GGTCCGAAAG ACGCCTTTGC CGAAGTGAAA ATACTCAGCA AGGGTGAGTC GGAATACGAA
ATGCTGACCG TCGGCACCAC GCGCGGCAGC CTGCAGTCTT CGAGCGGGCT GACCATCATG
CCCGACCGCA CCATTTTCGA CGTGTGCCCG GAATTCGACA CGATCATCGT GCCAGGCGGC
CTCGGCATTT TCGAGGCCTT CGACGACCCC GCGCTGAGCG GCTGGCTCAA GGATCGGCAC
AAGCAATGCC GGCGCATGTC GGCGATCTGC AACGGCCTGT TCGCGCTCGG TTCGGCCGGG
CTGCTCGACA ACCGCGTGGT CACCACGCAC TGGATGGACG TGCCGCGCCT CGCGGCCACC
TTTCCGAAGG CGCGCATCGA GCCCGACCAT ATCTACGTGC AGGACGGCAG CATCTTCACA
ACGGCTGGCG TGACCGCCGG GATCGACCTG TCGCTCGCGA TGATCGAAGC CGATTTCGGC
CGGCAAATGG CGCTCGATGT CGCCAAATAT CTCGTGGTCT ATCTTCGCCG TGCGGGCGGC
CAGTCGCAAT TCAGTCCGCT ACTCGAAGTG CAGGCTTCGC CGTCGACGCA AACGCTCTTG
TTGCAGCAGT ACATGCTCGA CAATCTGCAT GTCGATCATA CGGTGACCAC GCTCGCAGAA
CGCGCGCATA TGAGCGCGCG CAATCTGTCG CGGACCTTCA TGAAAGAATG CGGCGTCACG
CCGATGACAT TCCTCAGCCA CGCGCGAATC GACGCGGCAC GGCATTATCT GGAAGCCACC
ACTTTGCCCT TGCGTGAAAT CGCGCGCCGT TGCGGATTCG ACAATACGGA CGGGTTTCGC
CGCATCTTCC AGCGGCGTCT GCAGATCAAT CCCGCGGAGT ATCGCGAACG GTTCAGGTCG
AGCAATGGAT CGTCCAGAAA CGGCGTGGGC ACGGTGCTCG CTGAAACGCG TCACGCGGAT
AGCGCGAGCC GCGCTATCAA TACGTCGATC AAGGCCCGCA CTTTGGCTGA GGAATGA
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| Protein sequence | MKHIKVGMVV FPGFQLLDIA GPKDAFAEVK ILSKGESEYE MLTVGTTRGS LQSSSGLTIM
PDRTIFDVCP EFDTIIVPGG LGIFEAFDDP ALSGWLKDRH KQCRRMSAIC NGLFALGSAG
LLDNRVVTTH WMDVPRLAAT FPKARIEPDH IYVQDGSIFT TAGVTAGIDL SLAMIEADFG
RQMALDVAKY LVVYLRRAGG QSQFSPLLEV QASPSTQTLL LQQYMLDNLH VDHTVTTLAE
RAHMSARNLS RTFMKECGVT PMTFLSHARI DAARHYLEAT TLPLREIARR CGFDNTDGFR
RIFQRRLQIN PAEYRERFRS SNGSSRNGVG TVLAETRHAD SASRAINTSI KARTLAEE
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