| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5081 |
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| Symbol | |
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| ID | 6280388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1244509 |
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| End bp | 1245864 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616172 |
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| Product | Epoxide hydrolase domain protein |
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| Protein accession | YP_001888815 |
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| Protein GI | 187919784 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.548247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00364616 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGACA AGCTCCCTCC CCATTCGCCC TCGCGCCGCC GTTTTGTCAG CGCGGCAGCG
GCGGCCGTCG CTGCCGGCTC ATTGAGCCAG CTCGCGTTTG CCGAAACGAA TCAAGCGATT
ACTGAAGTTG TCCCGGCGAC TGGCAGCGAC AAGACCGCCA TTCGCGCACT TCGCGTGCAT
GTGCCGGAAT CGCAACTCGT CGACCTGCGC CGGCGCATCA AGGCGACGAG ATGGCCTGAT
CGGGAGACCG TCACCGACAA TTCGCAAGGC GTGCCGCTCG CGATGATTCA GGAACTTGCG
CGCCATTGGT CGACCGATTA CGACTGGCGA AAGTGCGAAG CGAAGCTCAA CTCGTTGCCG
AATTTCGTGA CCGAGATCGA TGGACTGGAT ATCCATTTCA TTCACGTCCG TTCGAAGCAC
GAAAATGCGA TGCCGCTCGT CGTCACGCAT GGGTGGCCAG GCTCGGTGAT CGAGCAGTTC
AAGATCATCG GTCCGCTGAC CAATCCGACC GCCTATGGCG CAAGGGCGTC CGACGCGTTT
CATCTGGTCA TTCCGTCTTT GCCGGGCTAT GGTTTTTCAG GCAAGCCGAC CACGACCGGG
TGGGGCCCGG AGCGTACCGC GCGCGCATGG GTCGTTCTGA TGAAGCGCCT TGGATACGAA
AAATTCGCCG CGCAAGGCGG CGATCTGGGC GGCATTGTCT GCAACGTCAT GGGCAAGCAG
GCGCCGCCGG AATTGTTAGG CATCCATGTC AACTTCCCCG CGACGCTTCC GCCCGAAATC
GTCAAGGCAC TCCAGGCTGG CGATCCACCG CCCGCCAACC TCTCCGCCGA CGAAAAGCAC
GCTTACGAGC AACTGAGTTC AGCGGCCATG AAGCGACGCG CGTACGCACT CGAGATGGGC
ACACGCCCGC AAACGCTCAC AGGACTGTCG GACTCTCCCG TCGGCCTCGC GAGCTGGCTT
CTCGATCACG GGGACGGGTA TGAGCAGCCG GCGGCGGCGT TGACCTCGGC TGTGTTCGGG
CACCCGGTCA ACGGGGAATC GGCTGGCGAC TTGACGCGCA ACGACGTACT AGACGACATC
ACGCTCTACT GGTTAACGAA TACGGGAATT TCCGCGGCGC GCTTCTATTG GGAGTCTCAC
TTCAACTTCC TCGCCGCCGC CGACGTATCC GTACCCGCTG CGATCAGCGT CTTTCCTCGC
GAGAACTATC AGGCGCCGCG CAGTTGGACA GAGCGGGCGT ATCACAACCT GATCTACTAC
AACAGGCTCG ACAAAGGCGG ACACTTCGCG GCGTGGGAAC AACCGCAACT ATTTACTGAA
GAGGTCCGCG CGGGCTTGAG GCCGCTGCGG ACATAA
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| Protein sequence | MSDKLPPHSP SRRRFVSAAA AAVAAGSLSQ LAFAETNQAI TEVVPATGSD KTAIRALRVH
VPESQLVDLR RRIKATRWPD RETVTDNSQG VPLAMIQELA RHWSTDYDWR KCEAKLNSLP
NFVTEIDGLD IHFIHVRSKH ENAMPLVVTH GWPGSVIEQF KIIGPLTNPT AYGARASDAF
HLVIPSLPGY GFSGKPTTTG WGPERTARAW VVLMKRLGYE KFAAQGGDLG GIVCNVMGKQ
APPELLGIHV NFPATLPPEI VKALQAGDPP PANLSADEKH AYEQLSSAAM KRRAYALEMG
TRPQTLTGLS DSPVGLASWL LDHGDGYEQP AAALTSAVFG HPVNGESAGD LTRNDVLDDI
TLYWLTNTGI SAARFYWESH FNFLAAADVS VPAAISVFPR ENYQAPRSWT ERAYHNLIYY
NRLDKGGHFA AWEQPQLFTE EVRAGLRPLR T
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