| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5074 |
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| Symbol | |
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| ID | 6279290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1235491 |
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| End bp | 1236405 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616165 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001888808 |
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| Protein GI | 187919777 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00820352 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGAGAC AGGACCGCTT GCCGCCTATG CAAGCGTTGA CGATGTTCGA GTCCGCCGCG
CGTCTGGCCA GCTTCACGGC GGCCGCGCGC GAACTGGGTT CGACCCAGCC CGCGGTGAGT
CAACGCGTCG TGCAACTGGA GGAAGCGCTG GGCGCCCCGC TGTTCGAGCG CGGCCATCGC
GGCGTCACCC TCACCGAAGA CGGCGAACGG CTCTTTGAAG CGGTACGCCA CGCGCTGGAC
ACGATTCGTT TAGCCACCAG CGAAATCCGC GCGCGGCGCA CGCCGCAAAC GCTCACCCTC
TCCACCGACT TCGGCTTCGC CACCTATTGG CTAATGCCGC GTCTATCGCA GTTCAAGGCG
CTGATGCCGG ATGTCGACGT GAAGATCATC ACGTCGCAAA GCGTATTCGA TCCGTCGCAC
GATCAGGCGG ACATCGCCAT TGCATTCGGC GATGAACATG CGGACTGGAC CGCGCGCGGC
GTGGTCAAGC TGTTTCCCGA GCGCGTCACG CCGGTGTGCA GCCCGGCGTT TCTCGCGGCG
CACCCGTCAC TGCGCGCGCC CGCTGATCTG ATGAATCTGC CGTTGCTGCA TCTCGAGCCG
ACCCAGCCGG CGCGCTGGCT CTCATGGGCC GACTGGTTCG CCGCCCATGA ACTCGATGCG
CCCGCCGCGC ATCGCGGTAT CACGTTCAAC AGTTTTACGC TGGTGGCCCA CGCGGCGATC
ATGGGCCAGG GCGTCGCGCT GGGCTGGGCG CCGCTGGTCG ACGAACTGCT TGCCACCGGG
CAACTCATCG AACTGTTCGA GCCGCCGGTC ATCACGGAGC GCGGCTATCT GCTCGTCACG
CAGCGCACGG CGACACCCGT GGTCAGCGCC TTTCGCCACT GGCTGCTCGG CGAATGCGGG
CTCGATGCGG AATAA
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| Protein sequence | MSRQDRLPPM QALTMFESAA RLASFTAAAR ELGSTQPAVS QRVVQLEEAL GAPLFERGHR
GVTLTEDGER LFEAVRHALD TIRLATSEIR ARRTPQTLTL STDFGFATYW LMPRLSQFKA
LMPDVDVKII TSQSVFDPSH DQADIAIAFG DEHADWTARG VVKLFPERVT PVCSPAFLAA
HPSLRAPADL MNLPLLHLEP TQPARWLSWA DWFAAHELDA PAAHRGITFN SFTLVAHAAI
MGQGVALGWA PLVDELLATG QLIELFEPPV ITERGYLLVT QRTATPVVSA FRHWLLGECG
LDAE
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