Gene Bphyt_5071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5071 
Symbol 
ID6280390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1232142 
End bp1233386 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content63% 
IMG OID642616162 
ProductOxidoreductase FAD-binding domain protein 
Protein accessionYP_001888805 
Protein GI187919774 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.407916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00354835 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGATC AGGCGACGTT TCAACTGAGC CCCGAACCGG CTCCAGATCA CGCTGCGAGC 
CGCGTCACGC AGCCGCGGTT CTGGGAGACG TTGCCGCCAC GCTGGAATAG CGATACCGAC
GACACGCTGG TGTGCTGCCA GGTTCGCCAG GAAACGCACG ACGTGAAGAG CTTTTTCTTT
CGCGCGCCTT CCGGGCGGGC GTTCGTGTTC GAGCCGGGGC AGTTCATCAC GCTGGAACTG
GAGATCGACG GTGAATCGAT CAATCGTTGC TATACGATTT CGTCGCCGCC CACGCGTCCG
CATACGATCT CGATCACGGT GAAGCGCGTG CCGGGCGGCA AAGTGTCGAA CTGGCTGCAC
GACAATCTGC ATGCGGGCGC GGAGGTTCGT GTGCTGGGAC CGTCGGGCGA ATTCACGTGC
GCGCGGCATC CGGCGCGCAA GTTCCTGTTC CTGTCGGCCG GTTCGGGGAT CACGCCGCTG
ATGTCGATGA GCCGCGCGCA TCACGAACTC GGTGAAGACA GCGATATTGT GTTCGTGCAC
AGTGCCCGCA CGCCGGACGA CATCATCTTC GCGCGCGAGC TCGATCTGAT CGCATCGAAT
CAGGCCCATT TCCGCACGGC GTTCGTTTGC GAGCGAGTGG GCGCGCGCAC GAACTGGCCT
GGCGTGACCG GCTTTCTGAC CTTGCCGTTG CTCAAGCTCA TCGCGCCGGA TTATCTGGAG
CGTGAGATTT TCACCTGCGG ACCCGCGCCG TATATGCAAG CCGTGCGCAA CCTGTTGGAC
GAAGGCGGTT TCGACCGGCG CCACTATCAC GAAGAAAGTT TTTCCTTCGA GACGGTCAGC
GAAGTGGCCG CGCAATTGAC CACCGCGCAT GTCGCGGATG CATTGCAGAG CGTTGGCGCG
CCGGTCACTG CGGACAGCTT CGTCGAGGCG CGCGAGGAAG CGCCGGGATT CGCGCCCGCA
CCCGTTTCCA TCGAAACAGA AATCCGCTTC AAGGTGAGTT TCGCCAAAAG CAATCGCGAG
ATCGAATGCG GCAGCGGCCA GCACGTGCTC GACGCGGCGA AGAAAGCGGG CGTGCGGTTG
CCGGCGTCGT GTACACAGGG CATGTGCGGC ACCTGCAAGG TCAAGCTGGT GTCGGGTGAG
GTCGCGATGA AACACGCCGG CGGGATTCGC CAGCGCGAGA TCGATCAGGG CATGGTGCTG
CTGTGCTGCA GCAAGCCGTT GAGCGACCTC GTCGTGGATA AGTAA
 
Protein sequence
MRDQATFQLS PEPAPDHAAS RVTQPRFWET LPPRWNSDTD DTLVCCQVRQ ETHDVKSFFF 
RAPSGRAFVF EPGQFITLEL EIDGESINRC YTISSPPTRP HTISITVKRV PGGKVSNWLH
DNLHAGAEVR VLGPSGEFTC ARHPARKFLF LSAGSGITPL MSMSRAHHEL GEDSDIVFVH
SARTPDDIIF ARELDLIASN QAHFRTAFVC ERVGARTNWP GVTGFLTLPL LKLIAPDYLE
REIFTCGPAP YMQAVRNLLD EGGFDRRHYH EESFSFETVS EVAAQLTTAH VADALQSVGA
PVTADSFVEA REEAPGFAPA PVSIETEIRF KVSFAKSNRE IECGSGQHVL DAAKKAGVRL
PASCTQGMCG TCKVKLVSGE VAMKHAGGIR QREIDQGMVL LCCSKPLSDL VVDK