| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5062 |
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| Symbol | |
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| ID | 6280016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1220438 |
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| End bp | 1221433 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616153 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001888796 |
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| Protein GI | 187919765 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.652687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0215007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG ATCGCACGGC GTCGTTGTCG CATTTCGCAT TCATGCCGGT CCCCAACTTC
ACCATGATTG CGTTCACCAA CGCGATCGAA GTCCTGCGCA TGGCGAATTA CCTCACGGGC
CAAACGCTTT ACCGCTGGTC GATCGTGAGT CCCGACGGCG GCCCGGTCAT GGCCAGCAAT
GGTCTGTCGG TCGACACGGG GCCGGTTGAA TGCGTCGGCC AGCCGGATAT CGTGTTCGTG
GTCGGCGGCA TCGACGTGCA GCGCGCCACC ACGCCGGCCC ATCTCTCCGC CTTGCGCCGC
TTCGCCCGCC TGGGCTGCGT GCTCGGCAGC CTGTGCACCG GCACGTATGC GCTGGCGCGC
GCCGGTTTGC TGGCCGGTTA TGCGTGCGCG ATTCACTGGG AGAACATGTC GGCGCTCAAG
GAAGAGTTTC CCGACACGCG TTTTCTGAAG GAACTGTTCG TGGTGGACCG CGATCGGGTG
ACGTGCACGG GCGGCGTCGC GCCGCTCGAC ATGATGCTGA ACCTGATTGC GCCGCGCGTC
GGCACGGCAC GCGTCACGCA GATCGCCGAG CAGTTCATCG TCGAACATGT GCGCGATACC
AGCGCGCAAC AGAAAATGCC GCTGGTGGCG CGGCTCGGCT CGGCCAACAA GTCGCTCTTC
GAAGTGATCT CGCTGATGGA GAACAATATC GAAGAGCCGC TCTCGCGCGA AGAACTCGCG
CGGCTCGCGG GCATGTCGCA ACGCCAATTG CAGCGTTTGT TCCGCGAGCA TCTGGGCATG
ACGCCGACGC ATTACTACCT GACGCTGCGC TTGCGGCGCG CACGCGAGTT GCTGCTGCAA
ACGGATATGT CGATCATGCA CATCACGATG GCATGCGGCT TCCAGTCGGC TTGCCACTTC
TCGAAGAGCT ATCGCGACGC GTTCGGCACG GCGCCGACGC GCGAACGACG CAAGCAGGCG
CCGTCGCTCG CTGCGGTGCC GGTGCTGGCG GCCTGA
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| Protein sequence | MSTDRTASLS HFAFMPVPNF TMIAFTNAIE VLRMANYLTG QTLYRWSIVS PDGGPVMASN
GLSVDTGPVE CVGQPDIVFV VGGIDVQRAT TPAHLSALRR FARLGCVLGS LCTGTYALAR
AGLLAGYACA IHWENMSALK EEFPDTRFLK ELFVVDRDRV TCTGGVAPLD MMLNLIAPRV
GTARVTQIAE QFIVEHVRDT SAQQKMPLVA RLGSANKSLF EVISLMENNI EEPLSREELA
RLAGMSQRQL QRLFREHLGM TPTHYYLTLR LRRARELLLQ TDMSIMHITM ACGFQSACHF
SKSYRDAFGT APTRERRKQA PSLAAVPVLA A
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