Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5053 |
Symbol | |
ID | 6278147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1210793 |
End bp | 1212211 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616144 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001888787 |
Protein GI | 187919756 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.122247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCG CCTATCCGCC GCGCGCGAGC GCAGCCGCCC GACTCGAACG GCTGCCATTC TCCGGTTATC ACCGGACCAT TTTCATCATC ATTGCCATCG CGTTCTTTTT CGATTCCGTC GATCTGGGCA CGATGACTTT CGTGCTCGGT TCGATCAAGA CGGAATTCGG CTTATCGACC GCGACGGCGG GGTTGGTGGC CAGCGCGAGT TTCTTCGGCA TGGTGATCGG CGCGGCAATT GCCGGCTTGC TGGCGGATCG CTTCGGCCGC CGGCCTGTCT TTCAGTGGAG CATGGTGTTG TGGGGGCTCG CGTCGTATCT GTGCTCGACG GCGCAGAGCG TGGAAGCGTT GATCTTTTAT CGCGTGCTGC TCGGCTTCGG CATGGGCATG GAATTTCCGA TTGCGCAGAC GTTGTTGTCG GAGTTCGTGC CGGCTGCGTC GCGCGGCCGT CTGATCGCGC TGATGGACGG CTTCTGGCCG CTCGGCTTCA TTACTGCGGG CGTGGTGTCG TACTTCGTCT TGCCGACCTT CGGCTGGCGC ACCGAGTTTG CGCTGCTCGC GATTCCCGCT GTATTCGTGT TGATCGTGCG CCGCGTCGTG CCGGAATCGC CGCGTTGGCT GGAACATCGC GGACGTCTCA GTGAAGCGGA CAAGATTCTC GCCGAGGTCG AAGTGAAGGT GATGAAAGCG GCCGGGCTGA GCCAGTTGCG CGCACCTGTC GTGCTCGCGG AACCGCCGGC CGCCAAGAGC ACGGGAGCGT TCCGCGAGAT CTGGAGCATG GCTTACCGGC GGCGCACGAT CATGGTGTGG ACGCTGTGGT TCTTCGCGCT GCTCGGTTTC TATGGGCTGA CGTCCTGGCT CGGCGCGTTG ATGCAGCAAG CAGGCTTTGC GGTGACGAAG TCGGTGCTGT ACACGGTGCT GATTTCTCTC GGTGGGATTC CGGGGTTTAT TTGCGCGGCG TGGCTGGTCG AACGTTGGGG CCGTAAACCG ACTTGCATCG CGTCGCTCGC GGGCAGTGCG GTGATGGCTT ACGTATATGG ACAAACCGCG CTGCATGCTC AGACGCCGAC CTTGTTGATC TGTGCCGGGC TGGCCATGCA GTTCTTCCTG TTCGCGATGT GGGCGGTGCT GTACACCTAC ACGCCGGAGC TATACGGGAC CGGCGCGCGC GCGACGGGTT CGGGCTTCGC GTCGGCGATT GGCCGCGTGG GTTCGCTGAT CGGACCTTAC GTGGTGGGCG TGGTGTTGCC GATGTTCGGC CAGGGCGGCG TGTTCTCGCT CGGCGCGATG TGTTTTGTGA TCGCAGCGGC GGCGGTGTGG ATCTTGGGCA TCGAGACGCG CGGGTTGGCG CTCGAGACGC TGGTGTCGGA GGCGGTTGAG ACGGATGCGC GAGGGGTGTT GAGTCCGGCG CGGGAGTGA
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Protein sequence | MSTAYPPRAS AAARLERLPF SGYHRTIFII IAIAFFFDSV DLGTMTFVLG SIKTEFGLST ATAGLVASAS FFGMVIGAAI AGLLADRFGR RPVFQWSMVL WGLASYLCST AQSVEALIFY RVLLGFGMGM EFPIAQTLLS EFVPAASRGR LIALMDGFWP LGFITAGVVS YFVLPTFGWR TEFALLAIPA VFVLIVRRVV PESPRWLEHR GRLSEADKIL AEVEVKVMKA AGLSQLRAPV VLAEPPAAKS TGAFREIWSM AYRRRTIMVW TLWFFALLGF YGLTSWLGAL MQQAGFAVTK SVLYTVLISL GGIPGFICAA WLVERWGRKP TCIASLAGSA VMAYVYGQTA LHAQTPTLLI CAGLAMQFFL FAMWAVLYTY TPELYGTGAR ATGSGFASAI GRVGSLIGPY VVGVVLPMFG QGGVFSLGAM CFVIAAAAVW ILGIETRGLA LETLVSEAVE TDARGVLSPA RE
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