| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5048 |
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| Symbol | |
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| ID | 6280061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1205073 |
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| End bp | 1206317 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616139 |
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| Product | sarcosine oxidase, beta subunit family |
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| Protein accession | YP_001888782 |
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| Protein GI | 187919751 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.275422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.249273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCT ATTCGATATT CAGCCTGTTG CGCAACGGGA TGTCGTATCA CGAGAACTGG
GAGCGACAGT GGAAGAGCCC TGAGCCCAAA CGTGAATACG ACGTCGTGAT CGTCGGCGGC
GGCGGGCATG GTCTTGCCAC CGCGTATTAC CTCGCCAAGG AACATGGCGT GCGCAATGTC
GCCGTGCTGG AGAAGGGCTG GATCGGCGGC GGCAATACGG CGCGCAACAC GACCATCGTG
CGCTCGAATT ATCTGTGGGA CGAGTCCGCT GCGCTCTATG AAAAAGCGAT GAAGCTGTGG
GAAGGGCTCT CGCAGGATCT GAACTACAAC GTCATGTTCA GCCAGCGCGG CGTGATGAAT
CTCGCGCACA CGCTGCAGGA CGTACGCGAC ACCGAACGCC GCGTGAATGC GAACCGGCTG
AACGGCGTGG ACGCCGAATT CCTCACGCCT GCACAGATCA AGGAAATCGA GCCGACCATC
AATCTGAACA GCCGCTATCC GGTGCTCGGC GCTTCGATCC AGCGGCGCGG CGGCGTAGCG
CGTCACGACG CGGTGGCCTG GGGCTTCGCG CGCGGCGCGG ATCAGGCCGG CGTCGATATC
GTGCAGAACT GCCAGGTAAC GGGCATTCGC CGCAACGGCA GTCAGGTGGT CGGCGTGGAC
ACCACGAAGG GTTTCATCAA GGCGAAGAAA GTCGCGATCG TCGCGGCGGG CAATACTTCG
ACGCTCGCCG ACATGGCCGG CGTGAGGCTG CCGCTGGAGA GCCATCCGTT GCAGGCGCTG
GTGTCGGAAC CGATCAAGCC GGTCGTCAAC ACGGTGGTGA TGTCGAACGC GGTGCACGCG
TATATCAGCC AGTCCGACAA GGGCGATCTG GTGATCGGCG CGGGCGTGGA CCAGTACACG
GGCTTCGGTC AGCGCGGCAG TTTCCAGATT ATCGAAGGCA CGCTCGAAGC GATCGTCGAA
ATGTTCCCGG TGTTCTCGCG CGTGCGGATG AACCGCCAGT GGGGCGGCAT CGTGGATGTC
TCGCCGGATG CATGCCCGAT CATCAGCAAG ACCGACGTGA AGGGGCTGTA CTTCAATTGC
GGTTGGGGCA CGGGCGGCTT CAAGGCCACG CCGGGTTCCG GATGGGCGTA CGCGCACACC
ATTGCCAAGG ATGAGCCGCA TGCGTTGAAC GCGGCGTTCT CGCTGGACCG GTTCTATACC
GGCCACCTGA TCGACGAACA CGGCGCCGCC GCTGTTGCCC ACTAA
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| Protein sequence | MSRYSIFSLL RNGMSYHENW ERQWKSPEPK REYDVVIVGG GGHGLATAYY LAKEHGVRNV
AVLEKGWIGG GNTARNTTIV RSNYLWDESA ALYEKAMKLW EGLSQDLNYN VMFSQRGVMN
LAHTLQDVRD TERRVNANRL NGVDAEFLTP AQIKEIEPTI NLNSRYPVLG ASIQRRGGVA
RHDAVAWGFA RGADQAGVDI VQNCQVTGIR RNGSQVVGVD TTKGFIKAKK VAIVAAGNTS
TLADMAGVRL PLESHPLQAL VSEPIKPVVN TVVMSNAVHA YISQSDKGDL VIGAGVDQYT
GFGQRGSFQI IEGTLEAIVE MFPVFSRVRM NRQWGGIVDV SPDACPIISK TDVKGLYFNC
GWGTGGFKAT PGSGWAYAHT IAKDEPHALN AAFSLDRFYT GHLIDEHGAA AVAH
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