Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5047 |
Symbol | |
ID | 6279494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1203567 |
End bp | 1204961 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642616138 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001888781 |
Protein GI | 187919750 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.533739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.269496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCA GCGTCTTCGA TCTGTTCAAG ATCGGTATCG GTCCGTCAAG CTCGCACACC GTGGGGCCGA TGATCGCTGC ATGCCGCTTC GCTTCGCATA TCGAAGACGC CAATCTGCTC GGCTTCGTGC GCGGCGTGAA GGTCGACCTG TTCGGCTCGC TCGGCGCGAC CGGCAAGGGG CACGGCACGG ACAAAGCGGT GCTGTTGGGA CTCGAAGGCA ATCTGCCCGA TTCCATCGAC CCGGACCTGA TCGAGCCGCG CCTGCAAGCG ATCCGCGTGA CAAAACAGCT GGTGCTGCTC GGCAAGCACC CGGTCAAATT CGACGAGCGC GAGCATCTGG GCTTTTTCCG CAAGCTGATG CCGGGTGCGC CGGGTTCGGG CATCGTGCAT CCGAATGGCA TGCGCTTTCA GGCTTTCGAC GAAAACGGCC AACTGCTGGT GGAGAAAGAG TATTACTCGG TCGGCGGCGG CTTCGTGGTG AACCGCGAAG GCGATCGCGT GAACGGCGTG CGCGCCGGCG CCGAAGTGCC ATATCCGTTT CGTACCGGCG ACGATCTGAT GCGCGTGTGC CGTGAGACCG GATTGTCGAT CGCGCAGATC ACGTTGCGCA ACGAATGCGC GGCGCGCCCC GAACAGGAAG TGCGCGAAGG TTTGCTGGCG ATCTGGCGCA CCATGTCCGC GTGCGTCGAA CGCGGCTGCA AGGTGCGCGG CGAGTTGCCC GGTCCGATGC ACGTGAAGCG CCGCGCCGCC GATCTGTGCG GACAATTGCG TTCGCGCTCG GAAGAGTCGC TGCGCGATCC GCTCTCCATG CTCGACTGGG TCAACCTCTA CGCGATGGCC GTCAACGAAG AAAACGCGGC GGGCGGCCGC GTCGTCACGG CGCCGACCAA CGGTGCGGCC GGCGTGATTC CCGCGGTGCT GCACTACTAC GTGAAGTTCA TGCACGCGTC GAACGACGAG GGCATCGTCA ACTTCCTGCT GACGGCGGCG GCGATCGGCA TCATCTACAA AGAGACGGCG TCGATCTCGG GCGCCGAAGT GGGCTGCCAG GGCGAAGTGG GCGTGGCCTG CTCGATGGCC GCCGCGGCGC TCGCCGCCGT GATGGGCGGC ACGCCGACGC AAGTCGAAAA CGCCGCCGAA ATCGGCATGG AACACAACCT CGGCATGACC TGCGATCCGG TCGGCGGCCT CGTGCAGATT CCGTGCATCG AACGCAACGC AATGGGCGCG ATCAAGGCAC TGAACGCCGC GCGCATGGCG ATGAAGGGTG ACGGCCAGCA TTACGTGTCG CTCGACAATG TGATCAAAAC CATGCGCGAA ACCGGCGCGG ACATGAAGAC GAAATACAAG GAGACGTCGC GCGGCGGATT GGCCGTCAAC GTCATCGAGT GTTGA
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Protein sequence | MNVSVFDLFK IGIGPSSSHT VGPMIAACRF ASHIEDANLL GFVRGVKVDL FGSLGATGKG HGTDKAVLLG LEGNLPDSID PDLIEPRLQA IRVTKQLVLL GKHPVKFDER EHLGFFRKLM PGAPGSGIVH PNGMRFQAFD ENGQLLVEKE YYSVGGGFVV NREGDRVNGV RAGAEVPYPF RTGDDLMRVC RETGLSIAQI TLRNECAARP EQEVREGLLA IWRTMSACVE RGCKVRGELP GPMHVKRRAA DLCGQLRSRS EESLRDPLSM LDWVNLYAMA VNEENAAGGR VVTAPTNGAA GVIPAVLHYY VKFMHASNDE GIVNFLLTAA AIGIIYKETA SISGAEVGCQ GEVGVACSMA AAALAAVMGG TPTQVENAAE IGMEHNLGMT CDPVGGLVQI PCIERNAMGA IKALNAARMA MKGDGQHYVS LDNVIKTMRE TGADMKTKYK ETSRGGLAVN VIEC
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