Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5046 |
Symbol | |
ID | 6280058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1202184 |
End bp | 1203266 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616137 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001888780 |
Protein GI | 187919749 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.311453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCG CTGAACCGCT TCCCCCTCAA TCGATCGACG GCACTTCGAA GCAGCGCATC CGCTTCGGCA TCATCCTGTT GCCGAACTTC ACGCTGACGG CGTTTTCGGG TTTCGTCGAC CTGCTGCGCC TGTCCGCCGA TGAAGGCGAT TTCAGCAAGC CCGTGCGCTG TTCATGGAGC GTGATAGGGG AAACCCTTGC TCCGGTGCGG GCGAGTTGCG GCATCCAGAT CACGCCGTGG GAGACGTTCG ATACCGCCGA GCCGTTCGAT TACGTCGTGG TGGTCGGCGG CTTGCTGCAT TCCGGGCCGG CCGCGAACGA TGCCACGCTC GCTTTCATCC GGCGGGCCGC CGCCACCGAT GCGACGCTCG TCGGCATGTG CACGGGCGTG TTTTCGCTGA TGCGCGCCGG CGTGCTCGAC GGTTACCGCA TTTGCGTGAG CTGGTTTCAC TACTGGGATT TCATCGAGCG TTTTCCGTCG GTGAACGAGG AAGCGCTGAT CGCCGACCGG CTGTTCGTGA TCGACCGGCG GCGCATTACG TGTTCCGGCG GGCGCGCGTC GATCGACGTG GCCGCCGCGA TCCTGTTGCG TCACTTCGAA ACCGCCACGG TGCAGAAGGC GCTGCGCATT CTGCTCGTCG ACGACATGCA GAAAGGCAAC GCACCGCAAC CGCATCCGCC GGGGCTCGCG CCCGCCACGC ATCCGAAGGT CAAGCGCGCG ATTCTGCTGA TGGAGCAGCA TGTGGGGCGC TCGCTGTCGC TCGATGAACT TGCGGGGAAA CTCGATCTTT CGCCGCGTCA GTTGGAACGG CTTTTCAAGG CGGAAACGGG TAAGGCGCCG CAGGCCTACG CGAAGCAGGT GCGGTTGCGG ACAGCCGCGT GGTTGTTGAC AAGTTCGGAT AAGACGGTGG CGGATATTGC TTCGAGTTGC GGGTTTTCCG ATGCTTCGCA CCTGGGGCGG GAATTCCGCA AGCAATTCGG TTTGCCGCCG ATGATGTATC GCGAGCAGCG CGGCACGGCG GCGGAAGCTG AGGATAGTGG GGATTATGAT GAGACGTTTC CGGGGCGGGC GCAGGCGATT TGA
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Protein sequence | MNSAEPLPPQ SIDGTSKQRI RFGIILLPNF TLTAFSGFVD LLRLSADEGD FSKPVRCSWS VIGETLAPVR ASCGIQITPW ETFDTAEPFD YVVVVGGLLH SGPAANDATL AFIRRAAATD ATLVGMCTGV FSLMRAGVLD GYRICVSWFH YWDFIERFPS VNEEALIADR LFVIDRRRIT CSGGRASIDV AAAILLRHFE TATVQKALRI LLVDDMQKGN APQPHPPGLA PATHPKVKRA ILLMEQHVGR SLSLDELAGK LDLSPRQLER LFKAETGKAP QAYAKQVRLR TAAWLLTSSD KTVADIASSC GFSDASHLGR EFRKQFGLPP MMYREQRGTA AEAEDSGDYD ETFPGRAQAI
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