| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5037 |
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| Symbol | |
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| ID | 6277682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1189900 |
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| End bp | 1191030 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616128 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001888771 |
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| Protein GI | 187919740 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.575355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.316837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCT ATCGCATCGC AACCATTCCC GGCGACGGCA TCGGCAAGGA AGTCGTACCC
GCTGGCCGGC GCGTTCTGGA AGCCATCGCC GGGAGCGGCG ACGCTTTCGG TTTCGAGTTC
GAGAATTTCG ACTGGGGCGG CGACTATTAC CGCGAGCATG GCGTGATGAT GCCGGCCGAC
GGACTCGATG CGATTCGTCA CAAGGATGCG ATTCTGTTCG GCTCGGCGGG CGACCCGGAT
ATTCCCGACC ACGTGACGCT GTGGGGGCTG CGCCTGAAAA TCTGCCAGGG CTTCGACCAG
TACGCGAACG TGCGCCCCAC GCGCATCCTG CCCGGCATCG ACGCACCGCT GAAGCGCTGC
GGACCGGAGG ATCTCGACTG GGTGATCGTG CGCGAGAACT CGGAAGGCGA ATATGCCGGC
GTAGGCGGCC GCGCGCACCA AGGCCATCCG ATCGAAGTCG CCACCGACGT TTCGATGATG
ACCCGCGCGG GCGTCGAACG CATTCTGCGT TTCGCGTTCC AGCTCGCGCA ATCGCGGCCC
CGCAAGCTGC TTACCGTGAT CACCAAGAGC AACGCGCAGC GTCACGCCAT GGTCATGTGG
GACGAGATCG CCGTGCAGGT CTCGAAGGAG TTCCCGGACG TGCGCTGGGA CAAGGAACTC
GTCGACGCCG CCACCGCGCG CATGGTCAAC CGGCCGGCCA CGCTCGACAC GATCGTCGCC
ACCAATCTGC ACGCCGATAT TCTCAGCGAC CTGGCCGCGG CGCTGGCCGG CAGTCTCGGC
ATCGCGCCGA CCGCCAATCT CGACCCCGAA CGTCGCTATC CGTCCATGTT CGAGCCGATT
CATGGCTCCG CATTCGACAT CATGGGCAAG GGTCTCGCGA ATCCGGTCGG CACTTTCTGG
TCGGTGGTGA TGATGCTGGA GCATCTCGGC GAGCACGCCG CCGCACAGCA ATTGATGGCG
GCAATCGAGC GCGTCACGGC GGACCCGTCG CTGCACACGG GCGACCTGGG CGGCACGGCC
ACGACCGCGC GGGTGACCGA TGCCGTGTGC GCGATCCTGG CGGCGGCCTC GCCGACCGAT
GCGTCTACCT CTGCACGAGC CGAACCGGTG GCGAGCGTCA AGGCCGCCTG A
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| Protein sequence | MKTYRIATIP GDGIGKEVVP AGRRVLEAIA GSGDAFGFEF ENFDWGGDYY REHGVMMPAD
GLDAIRHKDA ILFGSAGDPD IPDHVTLWGL RLKICQGFDQ YANVRPTRIL PGIDAPLKRC
GPEDLDWVIV RENSEGEYAG VGGRAHQGHP IEVATDVSMM TRAGVERILR FAFQLAQSRP
RKLLTVITKS NAQRHAMVMW DEIAVQVSKE FPDVRWDKEL VDAATARMVN RPATLDTIVA
TNLHADILSD LAAALAGSLG IAPTANLDPE RRYPSMFEPI HGSAFDIMGK GLANPVGTFW
SVVMMLEHLG EHAAAQQLMA AIERVTADPS LHTGDLGGTA TTARVTDAVC AILAAASPTD
ASTSARAEPV ASVKAA
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