| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5034 |
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| Symbol | |
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| ID | 6279036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1186556 |
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| End bp | 1188253 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616125 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001888768 |
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| Protein GI | 187919737 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.449206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.69733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC GCCATCACCC GCATTGGCCG CCGCAACTGC CACTGCACTT GACGCTGCCC
GAGACCAATC TCTTCTACAA CGCCGAAGTC TCGGCGGCGC GCTACCCGAA TAAGCCGTTC
ATCGTCTTCT ACGACACGGC GATCACGTTC GCCGAGTTCA AGGACGAAGC CGAACGGATA
GCGGGTTTCC TGCAACAGGA GTGTCGGGTC AAGGCCGGCG ACCGCGTGCT GCTGTATATG
CAGAACAGCC CGCAATGGAT CATCGCTTAC TACGGCATCC TGCGGGCGAA CGCGGTGGCG
GTGCCGGTCA ATCCGATGAA CATGACGGGC GAATTGGCGC ATTACGTCGA GGACAGCGGC
GCGACCACGA TCATCGCGCC GCAATGCCTG TTCTCGAATG TCGAGCCGTT GATCGGCAGC
GGACCAGGAA AGGGCGTCGA GCACGCAATC GTCGCGACGT ATAGCGATTA TCTGAAGAAA
ACCTCGCCGA TTCCCGTGCC TGAATTCATC GCCGCGTCAC GCAAGACGTT CGCGATTGCC
GGCGTCACGT CCTGGCAGGA AGTGCTCGAT CGGCACATTG CGCCGGGGCC GCTCACCGCC
GGTCCCGACG ATCTGTGCGT GATGCCTTAC ACGTCGGGCA CCACCGGCAA GCCCAAAGGC
TGCATGCATA CGCACCGCAG CGTGATGAGC ACGGCGCTGG GCGGCTGCGT CTGGTTCTCG
TCGCCGCCGG ACGGCGTTTA TCTATCCGTG CTGCCGCTCT TTCACGTGAC CGGCATGCAA
GGCGGCATGA ACAGCGCGGT CTTTTCCGGT ACGACCATCG TGCTGTTGCC GCGCTGGGAC
CGCGAGGCCG CCGCGCTATG CATGCAGAAA TATCGCGTCA CCGCATGGCA GTCCATCTCG
ACGATGATGG TCGATTTCCT CTCGAACCCG AAGCTCGACG AATACGATCT GTCGAGCCTC
ACCGGCACGC GCGGCGGCGG CGCGGCGATG CCGGACGCGA TTGCCAGAAA GCTCAAGGCG
CTGACCGGAC TCGACTATGT CGAAGGCTAC GGCATGACGG AGACGATTGC CGGCACGCAC
ATCAATCCGC CGCATCGTCC GAAGCCGCAG TGCCTCGGCA TTCCCGTGTT CGACGTGGAC
TCGCGCGTGA TCGATCCGGT CTCGCTGGAG GAACTGCCGC AAGGCGAAAC CGGCGAGATT
GTCACTCACG CGCCGCAAGT CATGCAGGGC TACTGGAGAA ATCCGAAGGC GACGGCGGAA
GTCTTCATCG AACTCGACGG CAAGCGGTTT CTGCGAACCG GCGATCTCGG CCATATCGAC
GAAGACGGTT ATTTCTTCAT GACCGACCGT CTCAAACGCA TGATCAACGC GTCCGGTTAC
AAGGTATGGC CGGCTGAAGT CGAGGCGCTG ATGTACCGGC ATCCGGCGAT TCACGAGGTC
TGTGTGATCG GCGTGAAGGA CGAAAAGCGC GGCGAGACCG TGAAGGCGCT GGTGGTGCCG
GACGCCGCGC ATGCGGGCAC GATTACTGCG CAGGAAATCA TCGACTGGGC GCATGAGCAG
ATGGCCGCGT ACAAGGCCCC GCGCATCGTC GAGTTCGTGG CGTCGCTGCC GAAGTCGGGC
AGCGGCAAAA TCTTGTGGCG CACATTGCAA GAACAGGATG CGGCGCGCGT GGCCGGTTCA
CGAGATTCGT CTGCTTGA
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| Protein sequence | MNERHHPHWP PQLPLHLTLP ETNLFYNAEV SAARYPNKPF IVFYDTAITF AEFKDEAERI
AGFLQQECRV KAGDRVLLYM QNSPQWIIAY YGILRANAVA VPVNPMNMTG ELAHYVEDSG
ATTIIAPQCL FSNVEPLIGS GPGKGVEHAI VATYSDYLKK TSPIPVPEFI AASRKTFAIA
GVTSWQEVLD RHIAPGPLTA GPDDLCVMPY TSGTTGKPKG CMHTHRSVMS TALGGCVWFS
SPPDGVYLSV LPLFHVTGMQ GGMNSAVFSG TTIVLLPRWD REAAALCMQK YRVTAWQSIS
TMMVDFLSNP KLDEYDLSSL TGTRGGGAAM PDAIARKLKA LTGLDYVEGY GMTETIAGTH
INPPHRPKPQ CLGIPVFDVD SRVIDPVSLE ELPQGETGEI VTHAPQVMQG YWRNPKATAE
VFIELDGKRF LRTGDLGHID EDGYFFMTDR LKRMINASGY KVWPAEVEAL MYRHPAIHEV
CVIGVKDEKR GETVKALVVP DAAHAGTITA QEIIDWAHEQ MAAYKAPRIV EFVASLPKSG
SGKILWRTLQ EQDAARVAGS RDSSA
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