| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5033 |
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| Symbol | |
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| ID | 6278103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1185696 |
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| End bp | 1186469 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616124 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001888767 |
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| Protein GI | 187919736 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0441783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.700268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTGA AGGACCTGTT TCAACTGGAC GGCAAAGTGG CACTCATCAC CGGCGGCTCG
CGCGGCCTCG GTCTGCAAAT GGCCGAGGCA CTCGGCGAAA TGGGCTGCCG CGTCGCCATC
ACCGCGCGCA AGGCCGATGA ACTTGCCGAG GCGAAAACGC ATCTGCAACA ACTCGGTATC
GAAGTGCAAA CGGTGGTCAA CGATCTGCAG CGCTTCGAAG GCATCCCCGG TCTCGTGGAT
GAAGTGCTGG GCCTTCACGG CCGCATCGAT ATTCTCGTCA ACAACGCGGG CGCGACATGG
GGCGCACCCG CCGAAGATTA TCCCGACGAA GCGTGGCACA AGGTCATGAA CCTGAACGTC
AACGCACCGT TCTTTCTCGC TCGCGAAGTC GGCAAGCGCA GCATGATCCC GCGGCGCGCC
GGCAAGATCG TCAATATCGC TTCGGTGGCG GGCTTGAAGG GTTCGCCGCC GGGCATGAAC
ACGATCGCGT ACAACACGTC CAAGGCCGCC GCGATCAATT TCACGCGGGC GCTCGCGGCC
GAGTGGGGCA AGTACAACAT CAACGTCAAT GCGATCTGCC CGGGCTTTTT TCCTTCGAAG
ATGACGGCGG GTCTGCTCGA CAAGCTCGGA GAAACGATCG TCGCACATAC ACCCTTGCAG
CGTTTGGGCG GCGAAGAAGA TCTCAAAGGT CCGATCGTGT TTCTCGCGAG CGAAGCGTCG
CGCCACATCA CCGGCCAGGA GTTCGCGGTG GATGGCGGCG CGATCATCAT CTGA
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| Protein sequence | MSVKDLFQLD GKVALITGGS RGLGLQMAEA LGEMGCRVAI TARKADELAE AKTHLQQLGI
EVQTVVNDLQ RFEGIPGLVD EVLGLHGRID ILVNNAGATW GAPAEDYPDE AWHKVMNLNV
NAPFFLAREV GKRSMIPRRA GKIVNIASVA GLKGSPPGMN TIAYNTSKAA AINFTRALAA
EWGKYNINVN AICPGFFPSK MTAGLLDKLG ETIVAHTPLQ RLGGEEDLKG PIVFLASEAS
RHITGQEFAV DGGAIII
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