Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5030 |
Symbol | |
ID | 6278087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1182248 |
End bp | 1182817 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642616121 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_001888764 |
Protein GI | 187919733 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.938239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.565327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAAT CCGCTGCCAT CGATCTGACC CAGGCGATCT CCTTGCGCGT GAAGACCGAG CGCGAGGCGC GCAACTGGTC GCTGAGCGAA CTGGCGGAGC GCTCGGGCGT GTCGAAGGCG ATGATCAGCA AGATCGAACG AGGCGAGGCG AGCCCTACGG CGACGGTGCT CGGGCGTCTG TCTGGCGCGT TCGGCCTGAC CTTGTCGACC TTGCTGGCGC TCGCCGAGCA GACTGGCGAA CGGCTCGTGC GGCATGCGGA CCAGTTAGTC TGGCAAGACC CGGAAACCGG CTACACGCGC CGGCGCATCT CGCCGCCCAC GGGCGGTGTG CTGGAATTGC TGGAGATAGA ACTGCCGCCG GGCGTGAAAG TACCGTACCC GCCGGATGCT TTCGTGTTCC AGCATCAACA GATCTGGGTG ACGCTCGGGG TGTTGACCTT CCGGGAGGGC AAGCAGGTTT ATCGGCTGGA AGCGGGGGAT TGTCTGCAAC TCGGGGCGCC GCTCGAATGC GAATTCTTCA ACGTGGGCAA AGACGTGTGC CGTTACGTGG TCGGCCTCGT CCGACGATAG
|
Protein sequence | MSESAAIDLT QAISLRVKTE REARNWSLSE LAERSGVSKA MISKIERGEA SPTATVLGRL SGAFGLTLST LLALAEQTGE RLVRHADQLV WQDPETGYTR RRISPPTGGV LELLEIELPP GVKVPYPPDA FVFQHQQIWV TLGVLTFREG KQVYRLEAGD CLQLGAPLEC EFFNVGKDVC RYVVGLVRR
|
| |