Gene Bphyt_5028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5028 
Symbol 
ID6279666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1179877 
End bp1180422 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID642616119 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_001888762 
Protein GI187919731 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID[TIGR02296] 4-hydroxyphenylacetate 3-monooxygenase, reductase component 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.296353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.178556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACA GGAGCACTTT CCGCGACGCG ATGGCCGGTC TCGGCGCCGC CGTCAACATC 
ATCACGAGCG ACGGCGCGGC GGGCCTGGCC GGTTGCACCG CGTCCGCGGT GTGCGGAGTG
ACCGACGAGC CGCCCACCCT GCTCGTCTGC ATCAATCGCA GCAGCCGCAA CAACGCGGCT
TTCCGCGCCA ACGGCAAACT CTGCGTCAAT GTGCTCAGCG CCGAACAGCA GACGCTCGCC
GCGCACTTCG CCACCGGCAC GCTGCCGATA GCCGAACGCT TTGCCGCCGC GCAATGGGAC
ACCCTCGCGA CGGGCGCACC GGTCCTGCAC GGCGCGCTCG CTTCGCTGGA CTGCGAGATC
GAATCGGTGA CCGAAGTCGG CACGCACACG GTGTTCTTCT GCGCGGTAAA AGCGGCGCAT
ACGCATGTCG AAGGCGACGC GCTGATCTAC TACGGCCGCC GCTATCACCG CGTCGGCACG
CGCTCCCTGC ACGCGACGCA TGCGGCCGCG GCCAGCGACG CGCTCGCTGC CGAATCGGCC
GGTTAA
 
Protein sequence
MLDRSTFRDA MAGLGAAVNI ITSDGAAGLA GCTASAVCGV TDEPPTLLVC INRSSRNNAA 
FRANGKLCVN VLSAEQQTLA AHFATGTLPI AERFAAAQWD TLATGAPVLH GALASLDCEI
ESVTEVGTHT VFFCAVKAAH THVEGDALIY YGRRYHRVGT RSLHATHAAA ASDALAAESA
G