Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5027 |
Symbol | |
ID | 6279470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1178594 |
End bp | 1179838 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642616118 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001888761 |
Protein GI | 187919730 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.177434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.163656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAG CCTCGGCAAA CCCGCACCGA CCGAGCCGCG CGGCAGCCGG CAAGACGCGT TCGCTCGCGA TTCTGCTGCT TTGCCAGGTG GGCGCGATGA GCGTGTGGTT TTCATCGTCG GCGGTGGTGG CGATCGTCAG GCAGGCCGAG AGTCTGTCCG CCATGCAAGC GACCCTGCTC ACCAGCGCCG TGCAGGCCGG GTTCGTGGCC GGCACTGTCA CGAGCGCCCT GCTCTCGCTT GCGGACCGCT TCGATCCACG GCGGCTCTTC ATGCTCAGCG CGCTGACGGC GGGCGCGGCC ACCGCGTGTC TCGTCTTCCT CACGCCGGCG AGTCCGCTCG CGATCCTGCT GCGGCTGCTG ACCGGCATCT GCATGGCCGG CGTTTATCCC GTCGGCATGC GGCTCGCGGC GACGTGGGCG AAAGGCGATC TCGGTCTGTT GATCGGGCTG CTGGTCGGCG CGCTGACCTT CGGCTCGGCG AGTCCGCATC TGCTGGCGGC GCTCGGCGGT TCGAACTGGC GCGCGATCTA TGGCATCTCG GCGTGCTGCG CGCTATTGGC GGGCGTCGCG ATTCTGCTGT GCGGCGTCGG GCCGAATATG GCGCGCGCGA CGCGCATCGA ATGGTCCGCG CTGGCCGGCG CCTGGCGCAA CCGCGCGCTG CGGCTCGCGA ACCTCGGTTA TCTCGGCCAC ATGTGGGAGT TGTACGCGAT GTGGGCATGG CTCGCCGTCT TCCTGCAAGC GAGCTTTGCG GCAGCCGGCA TGCGAGAGCC GCGCGCGGCG GCCGAATGGC TCACCTTCGG CGCGGTCGCG GCAGGCGCGC TCGGCGCGTG GCTCGGCGGC GTGCTGGCGG ACCGGCTCGG CCGCACCACG GTGACGATCG GCGCGATGGC CGTGAGCGGC GCGTGCGCGG CCTTGATGGG CTGGCTGCTC GGCGCGCCGG TCTGGCTGGT CGGCTGCGTG GCGCTGTGCT GGGGGATCTC CGTGATCGCC GATTCCGCGC AGTTCTCGGC GAGCATTGCG GAGCTCGCCG AGCCGGCGTC GATCGGCACG TTATTGACCG CGCAAACCTG CGCGGGTTTT CTGTTGACGC TGGTGAGCAT TCATCTGGTG CCGGACGTCG TCGGGTTGGC GGGTTGGCGC GGCGCCTTCA GCATGCTTGC CGTCGGGCCG CTGCTCGGTT GTATCGCGAT GGCGCGGTTG CGGCGCTTAC CGGATGCGCG ACGGCTTGCG GGCGGCCGGC GTTAG
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Protein sequence | MKEASANPHR PSRAAAGKTR SLAILLLCQV GAMSVWFSSS AVVAIVRQAE SLSAMQATLL TSAVQAGFVA GTVTSALLSL ADRFDPRRLF MLSALTAGAA TACLVFLTPA SPLAILLRLL TGICMAGVYP VGMRLAATWA KGDLGLLIGL LVGALTFGSA SPHLLAALGG SNWRAIYGIS ACCALLAGVA ILLCGVGPNM ARATRIEWSA LAGAWRNRAL RLANLGYLGH MWELYAMWAW LAVFLQASFA AAGMREPRAA AEWLTFGAVA AGALGAWLGG VLADRLGRTT VTIGAMAVSG ACAALMGWLL GAPVWLVGCV ALCWGISVIA DSAQFSASIA ELAEPASIGT LLTAQTCAGF LLTLVSIHLV PDVVGLAGWR GAFSMLAVGP LLGCIAMARL RRLPDARRLA GGRR
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