Gene Bphyt_5027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5027 
Symbol 
ID6279470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1178594 
End bp1179838 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content70% 
IMG OID642616118 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001888761 
Protein GI187919730 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.177434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.163656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG CCTCGGCAAA CCCGCACCGA CCGAGCCGCG CGGCAGCCGG CAAGACGCGT 
TCGCTCGCGA TTCTGCTGCT TTGCCAGGTG GGCGCGATGA GCGTGTGGTT TTCATCGTCG
GCGGTGGTGG CGATCGTCAG GCAGGCCGAG AGTCTGTCCG CCATGCAAGC GACCCTGCTC
ACCAGCGCCG TGCAGGCCGG GTTCGTGGCC GGCACTGTCA CGAGCGCCCT GCTCTCGCTT
GCGGACCGCT TCGATCCACG GCGGCTCTTC ATGCTCAGCG CGCTGACGGC GGGCGCGGCC
ACCGCGTGTC TCGTCTTCCT CACGCCGGCG AGTCCGCTCG CGATCCTGCT GCGGCTGCTG
ACCGGCATCT GCATGGCCGG CGTTTATCCC GTCGGCATGC GGCTCGCGGC GACGTGGGCG
AAAGGCGATC TCGGTCTGTT GATCGGGCTG CTGGTCGGCG CGCTGACCTT CGGCTCGGCG
AGTCCGCATC TGCTGGCGGC GCTCGGCGGT TCGAACTGGC GCGCGATCTA TGGCATCTCG
GCGTGCTGCG CGCTATTGGC GGGCGTCGCG ATTCTGCTGT GCGGCGTCGG GCCGAATATG
GCGCGCGCGA CGCGCATCGA ATGGTCCGCG CTGGCCGGCG CCTGGCGCAA CCGCGCGCTG
CGGCTCGCGA ACCTCGGTTA TCTCGGCCAC ATGTGGGAGT TGTACGCGAT GTGGGCATGG
CTCGCCGTCT TCCTGCAAGC GAGCTTTGCG GCAGCCGGCA TGCGAGAGCC GCGCGCGGCG
GCCGAATGGC TCACCTTCGG CGCGGTCGCG GCAGGCGCGC TCGGCGCGTG GCTCGGCGGC
GTGCTGGCGG ACCGGCTCGG CCGCACCACG GTGACGATCG GCGCGATGGC CGTGAGCGGC
GCGTGCGCGG CCTTGATGGG CTGGCTGCTC GGCGCGCCGG TCTGGCTGGT CGGCTGCGTG
GCGCTGTGCT GGGGGATCTC CGTGATCGCC GATTCCGCGC AGTTCTCGGC GAGCATTGCG
GAGCTCGCCG AGCCGGCGTC GATCGGCACG TTATTGACCG CGCAAACCTG CGCGGGTTTT
CTGTTGACGC TGGTGAGCAT TCATCTGGTG CCGGACGTCG TCGGGTTGGC GGGTTGGCGC
GGCGCCTTCA GCATGCTTGC CGTCGGGCCG CTGCTCGGTT GTATCGCGAT GGCGCGGTTG
CGGCGCTTAC CGGATGCGCG ACGGCTTGCG GGCGGCCGGC GTTAG
 
Protein sequence
MKEASANPHR PSRAAAGKTR SLAILLLCQV GAMSVWFSSS AVVAIVRQAE SLSAMQATLL 
TSAVQAGFVA GTVTSALLSL ADRFDPRRLF MLSALTAGAA TACLVFLTPA SPLAILLRLL
TGICMAGVYP VGMRLAATWA KGDLGLLIGL LVGALTFGSA SPHLLAALGG SNWRAIYGIS
ACCALLAGVA ILLCGVGPNM ARATRIEWSA LAGAWRNRAL RLANLGYLGH MWELYAMWAW
LAVFLQASFA AAGMREPRAA AEWLTFGAVA AGALGAWLGG VLADRLGRTT VTIGAMAVSG
ACAALMGWLL GAPVWLVGCV ALCWGISVIA DSAQFSASIA ELAEPASIGT LLTAQTCAGF
LLTLVSIHLV PDVVGLAGWR GAFSMLAVGP LLGCIAMARL RRLPDARRLA GGRR