| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5021 |
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| Symbol | |
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| ID | 6280022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1173835 |
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| End bp | 1174395 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642616112 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001888755 |
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| Protein GI | 187919724 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.434276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.047742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGAAC GCGACCCCGA CGCGCAATTG CTCGAACAGA TCGGCCGGCA AGATCCGGCC
GCCGTCCGCT CGCTCGTCGC GCGCAAGCTG CCGCGTCTGC TTGCGCTCGC CACTCGCATG
CTGGGCGACC GCATGGAAGC GGAAGACGTG GCGCAGGAGG TGTTCGTGCG CATCTGGAAA
CAGGCGTCGC GCTGGCGCGA AGGCGAGGCG AAGTTCGACA CGTGGATTCA TCGCGTCGCG
CTCAATCTCT GCTATGACCG GCTGCGCGGC CGGCGCGAAG AGCCGCGCGA CGAGCTGCCC
GAGGAGGCCG ATCCCGCGCC GTTGCCCGAG GCCGGACTCG AAGCGCGCGC CCAGGACCAG
CGGGTTCGCG ACGCACTCGC CGCGTTGCCG GCACGCCAGC GCGAGGCGCT GGTGCTCAAC
TACTACCAGG AGATGTCGAA CATCGACGCC GCAGCCCTGA TGGGCATCAG CGTCGATGCG
TTGGAAAGTC TGCTGGCACG CGCGCGCCGC AATCTGCGCG CTCAACTGGC CGGCAGCGGC
CTTAGCAAGG ACAAGTCATG A
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| Protein sequence | MSERDPDAQL LEQIGRQDPA AVRSLVARKL PRLLALATRM LGDRMEAEDV AQEVFVRIWK
QASRWREGEA KFDTWIHRVA LNLCYDRLRG RREEPRDELP EEADPAPLPE AGLEARAQDQ
RVRDALAALP ARQREALVLN YYQEMSNIDA AALMGISVDA LESLLARARR NLRAQLAGSG
LSKDKS
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