| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5016 |
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| Symbol | |
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| ID | 6279877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1168540 |
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| End bp | 1169232 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616107 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001888750 |
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| Protein GI | 187919719 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0704684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.049198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATT TCCCCTTCGA CGCCGTACTC TTCGACTGCG ACGGCGTGCT CGTCGACTCC
GAACCCATCA CCAACCGCGT GCTCACCGAC ATGCTCGGCG AGCTGGGCTG GCATTTGAGC
GTCGAAGAGA CCATGCGTAT TTTCGTCGGC AAAGCCGTTC GGGACGAAGC CGCGTTGATC
GAAGCGCGCA CCGGTGTCGC GATCACGACC GACTGGCTCA TGCAGTTTCG CGAGCGACGC
AATGCCGCGC TGGATCTCGA ACTGGTCGCG ATCCCCGGCG CGCCGGATGC GGTGCGCGCG
CTTCATGCGG CGCTGAATGG GCGCATTGCG GTGGCGTCAG GCGCGGATCG TATCAAGGTG
GAAATGCAGT TGGTGAAGGC CGGCATTTTC GACTGCTTCG AAGGACGCAT TTTCAGCGGC
CATGAAATGC CTCGCAGCAA GCCCTTTCCT GACGTCTACC TGGCGGCGGC CGCGGCGCTG
GATGTGGATC CGCGCCGTTG CGCGGTGATC GAAGACACGG TGACAGGCGC GACCGCAGGC
GTGGCTGCGG GCGCGACGGT GTTCGGTTAT TGCCCGCTCG AACTCGGCCA CAGCAGCGCG
ACCGCCTTGC ATGGCGCGGG TGCCGCGCAT GTGTTCAGGG ACATGGGTGC GTTGCCCGCT
TTGCTGGCGG GATGGCGCGC TCAAACGCAC TGA
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| Protein sequence | MADFPFDAVL FDCDGVLVDS EPITNRVLTD MLGELGWHLS VEETMRIFVG KAVRDEAALI
EARTGVAITT DWLMQFRERR NAALDLELVA IPGAPDAVRA LHAALNGRIA VASGADRIKV
EMQLVKAGIF DCFEGRIFSG HEMPRSKPFP DVYLAAAAAL DVDPRRCAVI EDTVTGATAG
VAAGATVFGY CPLELGHSSA TALHGAGAAH VFRDMGALPA LLAGWRAQTH
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