Gene Bphyt_5012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5012 
Symbol 
ID6280353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1165335 
End bp1165667 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content60% 
IMG OID642616103 
Productcytochrome o ubiquinol oxidase subunit IV 
Protein accessionYP_001888746 
Protein GI187919715 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.937774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0602721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATA GCCATAACGC CCACGCAGGT GAAAGTCACG GCAGCATCGG CAGCTATACG 
ACCGGCTTCA TTCTCTCCGT CGTTCTGACC GTCGCCGCTT TCGGCCTCGT CATGACCGGC
ACGTTGACCG GCGAGAACGC GCTGCTCGCG ATCGCGGGCC TCGCGCTCGT GCAGATCGTC
GTGCACCTGA TTTTCTTCCT GCATCTGAAT ACGTCGTCGG AGCAGCGCTG GAATGTGATG
GCGTTCGCCT TCACGCTGCT GACCGCGGTC ATCGTGATCG GCGGCACGTT GTGGGTCATG
CACAATGTCA GCATGCACAT GATGTCGCGC TGA
 
Protein sequence
MDHSHNAHAG ESHGSIGSYT TGFILSVVLT VAAFGLVMTG TLTGENALLA IAGLALVQIV 
VHLIFFLHLN TSSEQRWNVM AFAFTLLTAV IVIGGTLWVM HNVSMHMMSR