Gene Bphyt_5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5009 
Symbol 
ID6277689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1161838 
End bp1162737 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content59% 
IMG OID642616100 
Productubiquinol oxidase, subunit II 
Protein accessionYP_001888743 
Protein GI187919712 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.348819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0229485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAA AGACTCTGCG AGGGTCGATG AGTTTCATTT CCGCGAGCCT CGTGTTGCTG 
CTCTCGGGTT GCAGCAACCT CGATATTCTG AATCCGAAGG GGAGCGTAGG TCTGGCGGAA
CGTGAGCTGA TTGCCACGTC CACCTGGGCC ATGCTGATCG TGGTCGTGCC GGTGATCGCG
CTCACGCTGC TGTTCGCGTG GCGTTATCGC GCGTCGAATA AAGCCGCCGA TTACCGCCCG
GGCTGGGTGC ATTCCACCGG TATTGAAATC GCCATCTGGA CGATTCCGAC GCTGATCATT
CTGTTCCTCG CCGTGCTGAC GTGGAAGACC ACGCACGAGC TCGATCCGTA CAAGCCGCTC
GAGTCGCAGG TCAAGCCGAT CAACGTCGAA GTCGTCGCGC TCGACTGGAA GTGGCTGTTC
ATCTATCCGG ACCTCGGCAT TGCATCGGTG AACCAGCTGG CGTTCCCGGT CGGCACGCCG
GTGAACTTCA CGATCACGTC GGACACGGTG ATGAACTCGT TCTTCATTCC GCAACTTGGC
GGCCAGATCT ACGCGATGGC GGGCATGCAA ACGCGCCTGC ATCTGATCGC GGACGAAGCC
GGCAATTACG CGGGCGCCTC GGCGAATTTC AGCGGCAAGG GCTTCTCGGA CATGAAGTTC
CGCGCGCTCG CCACCTCGCC TGAAGAGTTC AACGCATGGG TTGCGAAAGT GCGCGCATCG
TCGGACAACC TCAGCATGGA CCGTTACCAC ACGGTGTCCG CGCCGACCGA GAAAGAGCCG
GTGCGCTACT TCTCGAGCGT CGATCCGAAG CTCTTTCACA ACATCATTGC CCGATACAAC
AACGGCAACG TCCTCGACAA CATGAAGGAC GCCAACTGTG CGCCAAAGGG CAAGGGGTAA
 
Protein sequence
MKGKTLRGSM SFISASLVLL LSGCSNLDIL NPKGSVGLAE RELIATSTWA MLIVVVPVIA 
LTLLFAWRYR ASNKAADYRP GWVHSTGIEI AIWTIPTLII LFLAVLTWKT THELDPYKPL
ESQVKPINVE VVALDWKWLF IYPDLGIASV NQLAFPVGTP VNFTITSDTV MNSFFIPQLG
GQIYAMAGMQ TRLHLIADEA GNYAGASANF SGKGFSDMKF RALATSPEEF NAWVAKVRAS
SDNLSMDRYH TVSAPTEKEP VRYFSSVDPK LFHNIIARYN NGNVLDNMKD ANCAPKGKG