Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5006 |
Symbol | |
ID | 6278469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1155924 |
End bp | 1158497 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616097 |
Product | protein of unknown function DUF214 |
Protein accession | YP_001888740 |
Protein GI | 187919709 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.624438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0207603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCG CTGATTCTCG TCATCTACCG CGCTTGCGAG GCCATCGTGC TCTCGCGCGC TGGCTGCTCG GCGCCGAATG GCGCAGTCAT CGCGGGCGCG CTCTGGTTGC GATTGCTACG ATCGCGCTCG GCGTCGCGCT CGGTTACGCC GTGCAGTTGA TCAACAGCGC GGCCTTCAAT GAATTCTCCG CGGCGGCCCG CAGCCTGTCG GGCGAAGCCG ATCTGCAGGT GCGCGGCGCC CAACCATTAG TCGACGAAGC CATCTATCCG CTGCTCGCCA ACGCGCCCGG AGTCGCGCTG GCCAGTCCCG TGCTTGCACT CGATGTCACC GTGCCCGACC GGAGCGCCGC ACTGCCGGTG CTCGGCATCG ACGTTTTCAA AGCGGGCCGT ATTGCGCCCG ATCTGATCGG CGTGCCGTCG CCGGATAAAC CGTTCGACAG CCTCGCGACC GACACCGTAT TTCTCTCGAC AGCAGCCCAG CAATGGCTGA AGGTGAAAGC AGGCGACGAG GTGGCGCTGC GAAGCGGCAC CTCGATCGTG CATTTGCGCG TGGCGGGCGG CATCGTGAGA ACACGGCCGG GCCAGCGGCT CGCCGTCATG GATATCGCCG CCGCGCAGTG GAAATTCGGC AAATTGGGCA AGCTGTCGCG AGTCGACGTG CAACTCGAAC GCGGCGTCGA CCGCGAGCGC TTCAGACGTG AACTGCAAGC GCGACTCGGC AACCAGTGGG TCATTGCCGA AACGCGTGAC GCCGAAAGCC GCACCGATCG CCTTTCACGG GCGTATCGGA TCAATATGAA CGTGCTCGCG CTGGTGGCCT TGTTCACGGG CGCATTTCTG GTGTTTTCGA CGCAGGCGCT GAGCGTCGTG CGACGCCGCG CGCAATTCGC CATGCTGCGT GTGCTCGGGT TGACGCGCGG CCAACTGCTG CGCCAGATCC TGGTGGAAGG CGCGCTGCTC GGTCTGCTGG GCTCGCTCGC GGGGCTCGCG CTCGGCTACG CGATGGCGAG CAGCGCGCTG CATTTTTTCG GCAGCGATCT GGGCGGCGGC TACTTTCCTG GTGTGCAGCC GCGAGTCGGC TTCGAACCGC TGGCGAGCGC GTTGTTTCTG ATGCTCGGGC TGGCCGTATC GGTGTTGGGC AGTCTCGCCC CCGCGCTGGA AGCGGCGCGT GCGCGGCCGG CCACAGCGCT CAAGGCGGGC GCCGAAGAAG GCGCGTTGGC GCGGCTCGCC ACACCGTGGC CCGCCCTGCT GTGTCTGCTG GCCGCCGCAG CGCTCACCCA GTTGCCGCCG CTCTTCGATG CGCCGATCGG CGGCTATCTG GCCGTCGCAT TGCTGCTGGT CGGCGGAATT GCGCTGATGC CGCGCGTGAC CGCGCTCATC TTCGGCGCGG CGAGCCGTGC TTTCGCCACG CGACGCCGGA CCGGCGCGGC CGGCACGCTG GCGCTCGCGC GTCTCGCGAA TGCGCCTGGG CACGCGTCGA TCGCCATGGG CGGTGTGCTG TCGAGCTTTG CGCTGATCGT CGCGATGGCC ATTATGGTCG CCAGCTTCCG GGTTTCCGTC GAAGACTGGC TGGTTCATCT GCTCTCCGCC GATCTCTATG TCCGCGTGGC GCCGAACGGC GACACCGGCG GTTTGCGGTT GGACGAACAG AGCCGGCTCG CGGCCGTTCC CGGTATTAAA ACAGCCGCAT TCGCCCGCAC TTCGCATCTG ACGCTCGACC CTGCGCGGCC CGACATCGCG CTGCTCGCGC GCGAGATCGA CGCAGCCGAT CCGGGCGCGA ATCTGCAGAT AACTGGAGCT GTGCTGCCGC CTGCGGAACT TCACGCCGGC GAAACGCCTG TTTGGGTATC CGAAGCAATG GTCGACCTGT ATCAATACAA GCTGGGTCAG CGAGTTCGAT TGCCGTTCGG CGAGCGCGGC CATGTGTTCG TGGTGGCGGG CGTATGGCGC GATTACGTGC GGCAGACCGG AGCCATTCAG ATACGGCTTG CCGATTTCCG GCGCTTGACC GGTGACACGA GTGCAACCGA TGTCGCCGTC ACCGTTCAGC CGGGAACGAG TGTCGATCAG GTGGTCGAGG GGCTGCGCGC ACTGCCCTTC GGCGCATCGC TGGATTTGTC GCTACCTGGT GAAATCCGCG CGCGCACGCT GGTGATTTTC GATCGCAGTT TTGCGGTCAC CTATCTTCTC GAAGCGGTCG CTATCGTGAT CGGCCTGTTC GGCGTGGCAG CCACGTTCTC CGCGCAGACG CTCGCTCGGT CGCGTGAGTT CGGCATGCTG CGGCACGTCG GCGTGACGCG CTCGCAGGTG CTCGCCATTC TCGCGCTCGA AGGCGGCATG CTCACCGCGT GCGGCATCGC ACTGGGCTTC GTGCTCGGCT CTGCGATCAG TCTGATTCTG GTGTTCGTCG TCAATCCGCA GTCGTTTCAT TGGAGCATGT CACTGCATGT GCCGTGGATC GCGCTTGCTA CCGTCGCGGT GGTGATGCTC GCTTCGTCGT GTTCGACAGC AGTGATCGCG GGACGCGACG CAGTATCGGT GGATGCTGTG CGTGCCGTGA AGGAGGATTG GTGA
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Protein sequence | MTSADSRHLP RLRGHRALAR WLLGAEWRSH RGRALVAIAT IALGVALGYA VQLINSAAFN EFSAAARSLS GEADLQVRGA QPLVDEAIYP LLANAPGVAL ASPVLALDVT VPDRSAALPV LGIDVFKAGR IAPDLIGVPS PDKPFDSLAT DTVFLSTAAQ QWLKVKAGDE VALRSGTSIV HLRVAGGIVR TRPGQRLAVM DIAAAQWKFG KLGKLSRVDV QLERGVDRER FRRELQARLG NQWVIAETRD AESRTDRLSR AYRINMNVLA LVALFTGAFL VFSTQALSVV RRRAQFAMLR VLGLTRGQLL RQILVEGALL GLLGSLAGLA LGYAMASSAL HFFGSDLGGG YFPGVQPRVG FEPLASALFL MLGLAVSVLG SLAPALEAAR ARPATALKAG AEEGALARLA TPWPALLCLL AAAALTQLPP LFDAPIGGYL AVALLLVGGI ALMPRVTALI FGAASRAFAT RRRTGAAGTL ALARLANAPG HASIAMGGVL SSFALIVAMA IMVASFRVSV EDWLVHLLSA DLYVRVAPNG DTGGLRLDEQ SRLAAVPGIK TAAFARTSHL TLDPARPDIA LLAREIDAAD PGANLQITGA VLPPAELHAG ETPVWVSEAM VDLYQYKLGQ RVRLPFGERG HVFVVAGVWR DYVRQTGAIQ IRLADFRRLT GDTSATDVAV TVQPGTSVDQ VVEGLRALPF GASLDLSLPG EIRARTLVIF DRSFAVTYLL EAVAIVIGLF GVAATFSAQT LARSREFGML RHVGVTRSQV LAILALEGGM LTACGIALGF VLGSAISLIL VFVVNPQSFH WSMSLHVPWI ALATVAVVML ASSCSTAVIA GRDAVSVDAV RAVKEDW
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