| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5001 |
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| Symbol | cobN |
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| ID | 6278507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1141704 |
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| End bp | 1145513 |
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| Gene Length | 3810 bp |
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| Protein Length | 1269 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616087 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_001888735 |
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| Protein GI | 187919704 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0676394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000811844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCATCTGC TGCGCACCAC GCCGGGCGGT TTTGTCGACG ACACGCAAGG CGTGATCCGG
ATCGATCAGC AACCCGCGGA TATCGTGGTG CTCAGTTCCG CCGACACTAC GCTTTCGCTG
CTGGCCAGCG TTTTTCCGCG CCTGGGTGAA GGCTTCCCGG GCGTGCGGCT CGCGAACGTC
ACGTATTTGC GGCAACCGGC GTCGGTGGAT TTTTATCTCG AAGACGTCTT GCAGCATGCG
CGCGTGGTGG TGGTCGACCA CCTCGGTGGC GAAGCGTATT GGCCTTACGG TATCGAGCAG
GTGGTGGCGC TCGCCGAGCG CAAGCAGCAG ACGCTCGCCA TGTTCTCCGG CGACTTGCAG
GAAGATCCGA ACCTGCTCGC GCGCAGCACC GCGAGCGCGG ATCTGTGTCA TCAACTGTGG
CGCTATCTGC GTGAAGGCGG CCCGCAAAAT GCCGAGGCGT TCCTGCGCTG TATCGCGCAC
CGCGCCTTCG GCTGGGGGCG CGAACCTGCG CCACCGCGCG CGTTGCCCGC CGCGACGCTC
TACCATCCCG AGCGCGATAC GCCGACCGTG GCCGACTGGC AGGCGCGCTG GAAACCAGGA
GCGCCGGTTG CGGCGATCCT CTTCTACAAG GCGCATCTGC AGGCCGCCAA CACGGCGGTG
TTCGACGCGC TGATCGACGC ACTCGAATCG CAAGGTCTGA ATCCGCTGCC GATCGCGATT
ACCTCGCTGA AAGATGCGAT GAGCCGCGAC GTCGTGCAAT CGCTGTGCGC GCAGCACGAG
GTGGCGCTGG TGCTGAATAC GACCGCGTTC GCCGCCTCCG CGATCGACGA CCCCGAGCCG
CTCGCGCTCG CCGGCGACGC GCCGGTGCTG CAGGTGATTC TGAGCGGCGG CAATCGCGAG
GATTGGGTCA AGGACAATCA GGGTCTCAAT TCGCGCGATA TCGCCATGCA TATCGCGCTG
CCGGAAGTGG ACGGCCGCAT CATCACGCGC GCGATCAGTT TCAAGGGACT CGCGTACCGT
TGTCCGCACA CGCAGGTCGA TGTGGTGCGT TATCAGCCGG ACGCCGGGCG GGTAGGTTTT
CTCGCCGAAT TGAGCCGGCG CTGGTGCCGT CTGCGTTCAC TCGATAACGC GGACAAGAAG
CTCGCGCTGA TCCTCGCCAA CTATCCGATG AGCGAAGGGC GCATCGGCAA TGGCGTGGGG
CTCGATACGC CGGCTTCGGT GGTCGGTATT CTGTCGATGC TGCGCGACGA AGGCTATCGT
CTCGCGGATT TGCCCAGGAA CGGCGACGCG CTGCTGAAAA AGCTCACCGA AGGCGTGACC
AACGATCCGG TCGTGCGCGA TCTGCGTCCC GCGCTGCAAA GCCTCGCGCT CGACGACTAT
CTGCGGTATT TCAACGCCTT ACCTCTTGAA GTACGCAACG CGTTGAACGC GCGTTGGGGC
ACGCCGGACG AGGACCCGAC GCTGCGGCGC GGCCGCTTCA TGATCGCGGG CTGGCGTTGC
GGTCAGGTGT TCGTCGGCAT TCAACCATCG CGCTCGCGCG AGCAGGGTGA TTACGCGAGC
TATCACGACG CCGAACTCGT ACCGCCACAT GCGTATCTGG CGTTCTATTT CTGGTTGCGT
CACCAGTTCG GCATCGACGC AATCGTGCAT GTCGGCAAGC ACGGCAATCT GGAATGGCTG
CCCGGCAAGA GCGTCGCATT GAGCGACACG TGCTGGCCCG ATCTGATTCT CGGGCCGATG
CCGCATCTGT ATCCGTTCAT CGTCAACGAT CCGGGCGAGG GCAGCCAGGC CAAGCGGCGC
GCGCAGGCTG TGATCATCGA TCATCTGATG CCGCCGCTCA CGCGTGCCGA AAGTTATGGA
CCGTTGCAGG ACCTGGAGCG TCAGGTCGAC GAATACTATG AAGCGCTGAT GGTCGACCCG
CGCCGCTCGA AACTGTTGCG GCGCACGATT CTGGCGACCA TCGTCGAACA TAAACTGCAT
GAGGAACTGA GTCTCGCGGC GCCCAACGGA CAGGACGATG AAGACGCGCT GCTCACGCGC
GTCGACGCGT GGCTATGCGA GCTGAAGGAA GCGCAGATTC GCGACGGCTT GCATACGTTC
GGGCAATCGC CTGATGGCGT GCAGCGGCGG GATACGTTGC TGGCGCTGGG ACGTTTTCCA
GTCGGCGACG GGCAAGGCGG CAAGGCCGGT TTGATCGATG CATTGGCGCG TGATCTGGAG
ATGGATCATC TGTTCGACCC GTTGTCGGTG GATTGGTCGG CGGTGTGGGA CGGTCCGCGT
CCCGACGTGC TGCAATGCGT GAGCGATGCG CCGTGGCGGC ACTGCGGCGA TACGCGTGAA
CGGCTGGAGT TGCTGGCGGC TGAGTTATTG CGCGGCGTGT GCGGTGATCG AACGGACGCA
TCAGCAACGG CGTTGCCGCT CGCAGTGAGC TTGCCGCGAG CGGAGCAAGT GATCGAGCGT
CTGCGTAACG ACGTGCTGCC GCGGCTCGAC GCCTGCGGTC CACAGGAAAT GCTTCAGCTA
AAGCGCGGCC TCGAAGGCCG TTTCGTGCCG CCGGGGCCGA GCGGTTCGCC GTCGCGTGGC
CGGCCCGACG TGCTGCCCAC CGGCCGCAAC TTCTATTCGG TCGACACGCG CGCGGTGCCG
ACGCAAGCCG CCTGGTCGCT CGGCTTGAAA TCTGCCCAGC AGTTGATTGA ACGGCATTTG
CAGGAGAAAG GCGACTATCC GCGCGCCATT GGTCTGTCCG TTTGGGGCAC CGCGACCATG
CGCACCGGTG GCGACGATAT CGCCCAAGCG CTCGCATTGC TCGGCGTTCG GCCGAAGTGG
GCGCCGGGCA GCCATCGCGT GACCGATTTT GAAATCATGC CGATCGAGGT GTTCGACCGG
CCGCGAATCG ATGTCACCTT GCGGGTGTCC GGATTCTTCC GCGACGCCTT CGCCAACGTC
ATGCATTTGT TCGACGCCGC CGTGCAGGCC GTCGCCGAAC TCGACGAACC CGCGGACCTG
AATCCGATTC GCGCGCGCGT GCTGCGCGAA CGCGATGCGC TGATCGCGCG CGGCATGGAC
GCCGCCGAAG CGCGCAAGCG CGCCGGCTGG CGTGTGTTCA GCGCGCAGCC CGGCGCCTAC
GGCGCGGGTC TGCAGGACAT GATCGACTCG CAGCAGTGGC AGACCGACGC CGATCTGGCG
AACGCATATC AGGCGTGGGG CGGCTACGCG TACACGCAAA AGAGCGCGGG CGAAGAAGCG
CGCCACGCGT TCGGCGCACG TCTCGCCGCA ATGGACGTGG TGCTGCAGAA CCAGGATAAC
CGCGAGCACG ACCTGCTCGA TTCGAACGAT TACTACCAGT TCCAGGGCGG CATGGTTGCC
GCGGTGCGCC ATCTGGCCGG CGATCAGCCG AGCGTGTATC ACGCCGACCA CAGCAATCCG
GCCGCGCCGC GCGTGCGTAC GCTGCACGAG GAGATCGCGC GTGTGATCCG CTCGCGCGTG
GTCAATCCGA AATGGCTCGA TGGCGTGAAG CGTCATGGGT ACAAGGGCGC GGCTGAAATC
GCCGCGACCG TCGATTATCT GTATGGCTAC GATGCGACGG CGCGCGTGAT CGCGGATCAT
CAATATGCGC TCGTGACCGA CGCCTATCTG AACGACGCAG ACACCCGCGA GTTCTTGCAG
CGGCATAACC CACACGCGTT GCATTCGATC TGCGAGCGCC TGCTCGAAGC GATGCAGCGC
GGTTTGTGGC AGGCGCCCGG CGACTATCGC TCGCAAGTCG AACAGCATCT GCTTGCGAGC
GAGCAGCAGA TCGAAGGAAT GCAAACATGA
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| Protein sequence | MHLLRTTPGG FVDDTQGVIR IDQQPADIVV LSSADTTLSL LASVFPRLGE GFPGVRLANV
TYLRQPASVD FYLEDVLQHA RVVVVDHLGG EAYWPYGIEQ VVALAERKQQ TLAMFSGDLQ
EDPNLLARST ASADLCHQLW RYLREGGPQN AEAFLRCIAH RAFGWGREPA PPRALPAATL
YHPERDTPTV ADWQARWKPG APVAAILFYK AHLQAANTAV FDALIDALES QGLNPLPIAI
TSLKDAMSRD VVQSLCAQHE VALVLNTTAF AASAIDDPEP LALAGDAPVL QVILSGGNRE
DWVKDNQGLN SRDIAMHIAL PEVDGRIITR AISFKGLAYR CPHTQVDVVR YQPDAGRVGF
LAELSRRWCR LRSLDNADKK LALILANYPM SEGRIGNGVG LDTPASVVGI LSMLRDEGYR
LADLPRNGDA LLKKLTEGVT NDPVVRDLRP ALQSLALDDY LRYFNALPLE VRNALNARWG
TPDEDPTLRR GRFMIAGWRC GQVFVGIQPS RSREQGDYAS YHDAELVPPH AYLAFYFWLR
HQFGIDAIVH VGKHGNLEWL PGKSVALSDT CWPDLILGPM PHLYPFIVND PGEGSQAKRR
AQAVIIDHLM PPLTRAESYG PLQDLERQVD EYYEALMVDP RRSKLLRRTI LATIVEHKLH
EELSLAAPNG QDDEDALLTR VDAWLCELKE AQIRDGLHTF GQSPDGVQRR DTLLALGRFP
VGDGQGGKAG LIDALARDLE MDHLFDPLSV DWSAVWDGPR PDVLQCVSDA PWRHCGDTRE
RLELLAAELL RGVCGDRTDA SATALPLAVS LPRAEQVIER LRNDVLPRLD ACGPQEMLQL
KRGLEGRFVP PGPSGSPSRG RPDVLPTGRN FYSVDTRAVP TQAAWSLGLK SAQQLIERHL
QEKGDYPRAI GLSVWGTATM RTGGDDIAQA LALLGVRPKW APGSHRVTDF EIMPIEVFDR
PRIDVTLRVS GFFRDAFANV MHLFDAAVQA VAELDEPADL NPIRARVLRE RDALIARGMD
AAEARKRAGW RVFSAQPGAY GAGLQDMIDS QQWQTDADLA NAYQAWGGYA YTQKSAGEEA
RHAFGARLAA MDVVLQNQDN REHDLLDSND YYQFQGGMVA AVRHLAGDQP SVYHADHSNP
AAPRVRTLHE EIARVIRSRV VNPKWLDGVK RHGYKGAAEI AATVDYLYGY DATARVIADH
QYALVTDAYL NDADTREFLQ RHNPHALHSI CERLLEAMQR GLWQAPGDYR SQVEQHLLAS
EQQIEGMQT
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