| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4995 |
|---|
| Symbol | |
|---|
| ID | 6279240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1135754 |
|---|
| End bp | 1136413 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642616081 |
|---|
| Product | cob(II)yrinic acid a,c-diamide reductase |
|---|
| Protein accession | YP_001888729 |
|---|
| Protein GI | 187919698 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | [TIGR02476] cob(II)yrinic acid a,c-diamide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.104109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.00247191 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGC CTTTTAACGA TTCCGAGCGC GACGCCGTCT ACCGCGCGAT CTACGAACGC
CGCGACATGC GCCATTTCGT GCGCGATCCG GTCGATCCGG CCGTGTTGCA GCGCCTGCTC
GACGCCGCAC ATCACGCGCC GAGCGTCGGC TTCATGCAGC CGTGGCGGAT CGCGCGGATC
ACAGATCCCG CGCTGCGCAC GGCCCTGCAC GACGCGGTGG AAAACGAACG GCTCGCCACC
GCCGATGCGC TCGGCAAACG CCGCGAAGAG TTCATGAAGC TGAAAGTGGA AGGCATGCTG
GAGTGCGGCG AACTGCTGGT GATGGCGCTG ATGGACGGCC GCGAACGTCA CATTTTCGGC
CGCCGCACCT TGCCGGAGAT GGACCTCGCG TCGGTGGCCT GCGCGATCCA GAACATGTGG
CTCGCCGCGC GCGCCGAAGG TCTCGGCATG GGCTGGGTAT CGCTATTCGA CGTCGACGCG
GTTCGCCAAC TGCTGCGCAT GCCCGAGGGC GCGCGTCCCG TGGCGATTCT GTGTCTCGGC
CACGTCGACC GGTTTTATAG CGAGCCGATG CTGGAAACCG AACGCTGGGC GAGCCGTGTG
CCGCTCGCCG ATTGCGTGTT CGAAAACCGC TGGCCCGAAG ACAACGATGC GCCGAAATGA
|
|---|
| Protein sequence | MAKPFNDSER DAVYRAIYER RDMRHFVRDP VDPAVLQRLL DAAHHAPSVG FMQPWRIARI
TDPALRTALH DAVENERLAT ADALGKRREE FMKLKVEGML ECGELLVMAL MDGRERHIFG
RRTLPEMDLA SVACAIQNMW LAARAEGLGM GWVSLFDVDA VRQLLRMPEG ARPVAILCLG
HVDRFYSEPM LETERWASRV PLADCVFENR WPEDNDAPK
|
|---|
| |