| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4980 |
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| Symbol | |
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| ID | 6280217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1116603 |
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| End bp | 1117121 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616066 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001888714 |
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| Protein GI | 187919683 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.448739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0655006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTCC GTGACGAGTT GATGGAGCAT GTGCCGCGAT TGCGGCGCTA TGCGCGAGCG
CTGATCAACA ATCGCGACCT CGCCGACGAC CTGGTGCAGG ACACGCTCGA GCGCGCGCTC
GGCCGCACCG GCATGTTCCA GCCGGGCACC GACCTGCGCG CGTGGCTGTT TACGATCATG
CACAACGTGT TCGCCAATCA GGCGCGCAAG GCGTCGGCGC GCGCCGTCCA CGTGGCGGTC
GACGACGAAA GCGTGTCGGA GAGCGAATTC GCCGTGCCCT CCGAGCAGAC CCGCTCTCTG
GAAATGCGCG ACCTCGACTA CGCGTTGCAG CGTCTGCCCA TGGAGCAGCG CGAAGTCGTG
CTGCTGGTAG GCCTCGAGGA AATGAGCTAT GCCGACGTGG CGCTTGCGCT GAACATCCCG
CTCGGCACGG TGATGTCGCG GCTGTCGCGC GGACGCGAAC GCTTGCGGGC GTTGATGGCG
GGCACGCAGC CCGGTGCAAA ATTACAGGTG GTGCGATGA
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| Protein sequence | MDVRDELMEH VPRLRRYARA LINNRDLADD LVQDTLERAL GRTGMFQPGT DLRAWLFTIM
HNVFANQARK ASARAVHVAV DDESVSESEF AVPSEQTRSL EMRDLDYALQ RLPMEQREVV
LLVGLEEMSY ADVALALNIP LGTVMSRLSR GRERLRALMA GTQPGAKLQV VR
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