| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4978 |
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| Symbol | |
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| ID | 6278556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1114729 |
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| End bp | 1115685 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616064 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001888712 |
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| Protein GI | 187919681 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.327567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.11746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAG TGACACCGAT ACCGGCCGGG CAACCGAAAC CGCTGCTGCA ACCGCTGCCG
CATAGCGGTT CCCGCCTCAC GTTGCGCTCG AGCGGATTGC TCGGCTGGCA GGGCTTCGGC
GCGGAACTGG TCAACGTGTC TGCCGGGCTG CACCGTATTC CCGCGTTCAA GTATCACCGG
GTGGGCGTGC ATGTCGGCGC GCCGGTCAGG GCGCGCTGCC TGTGCAACGA GCGCGGCCAC
TCGCGAATCC AGGCGCATGG CGACGCCGAC GTGATTCCCG CCGGTCTCGA CGGGCAGTGG
AGCGACGAGG CCGCCTGCAC GATTTTCAGC GTGTGGATCA GCGAGGCGTT CGCGCAACGG
ACCGTCGAGC AACTGTCGTT GAAATCCGGC GATGCGCAAT TGCGTCCGCA ATTCCAGATG
CGCGATCCGC GCTTCCAGCA TCTCGCCTGG GCCTTGCGCG CCGAGCTCGA AGCGGACGAG
GCATCCGATC CGCTCTACGC CGAAAGCCTG TGTACGGCGA TGGTGGTGCG CCTGATCGGC
GGTGCGCCAA CGCTCGAGAA CAAGCGGCGC ACGCTCGCGC CGAAAACGGC CGCGCGCGTG
ATCGAGTTCA TTGAGGCGCA TCTCGACCAG CGTCTCACGC TAAGCGAACT GGCCGCGCTC
GTCGAGTTGA GCGTGCCGCA TTTCAAGGTG CTGTTTCGCG AGACGCTCGG CATGCCGGTG
CATCGATACG TGGTGCAGCG GCGCGTGGAG CGCGCGCGAA CGTTGCTGTT GGAAGGCAAG
CTCAATGCGA GTCAGATTGC GCTCGATACG GGCTTCGCGC ATCAGAGTCA CATGGCGCAT
TGGATGGGCC GCCTGTTGGG CGTGACGCCG CGCGAGCTGA TCAGATCAGG TGCGAATGCG
GGCAATATTG TCGAGCTCGA TTCGAACCAG AGCCGCAACA TTGCCATACC GCGATAA
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| Protein sequence | MNAVTPIPAG QPKPLLQPLP HSGSRLTLRS SGLLGWQGFG AELVNVSAGL HRIPAFKYHR
VGVHVGAPVR ARCLCNERGH SRIQAHGDAD VIPAGLDGQW SDEAACTIFS VWISEAFAQR
TVEQLSLKSG DAQLRPQFQM RDPRFQHLAW ALRAELEADE ASDPLYAESL CTAMVVRLIG
GAPTLENKRR TLAPKTAARV IEFIEAHLDQ RLTLSELAAL VELSVPHFKV LFRETLGMPV
HRYVVQRRVE RARTLLLEGK LNASQIALDT GFAHQSHMAH WMGRLLGVTP RELIRSGANA
GNIVELDSNQ SRNIAIPR
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